RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 UBXN11Q5T124 520 aa15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 TDRD10Q5VZ19 366 aaKnown RBP15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 TWF2Q6IBS0 349 aaKnown RBP15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 ANKRD33Q7Z3H0 272 aa15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 ANKRD36BP1Q96IX9 119 aa15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 TOX2Q96NM4 488 aa15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 TRAIPQ9BWF2 469 aa15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 STK33Q9BYT3 514 aa15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 ERVK-5Q9HDB9 667 aa15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 PADI3Q9ULW8 664 aa15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 DERAQ9Y315 318 aa15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 FHOD1Q9Y613 1164 aa15.36■□□□□ 0.05
CLTCL1-212ENST00000622493 ANK1P16157 1881 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 LACTBL1A8MY62 500 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 TNNC2P02585 160 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 APBA1Q02410 837 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 PAK2Q13177 524 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 LPIN1Q14693 890 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 WDR44Q5JSH3 913 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 SFMBT2Q5VUG0 894 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 LMBRD2Q68DH5 695 aaPredicted RBP15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 PHLDB3Q6NSJ2 640 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 SLC39A5Q6ZMH5 540 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 OR5B17Q8NGF7 314 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 SEMA4DQ92854 862 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 NT5C1BQ96P26 610 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 AGO3Q9H9G7 860 aaKnown RBP15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 SNTG2Q9NY99 539 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 AIPL1Q9NZN9 384 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 DNAJC12Q9UKB3 198 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 CITO14578 2027 aa15.35■□□□□ 0.05
CLTCL1-212ENST00000622493 PITPNM1O00562 1244 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 PHACTR2O75167 634 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 GHRP10912 638 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 COL6A1P12109 1028 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 JAM2P57087 298 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 TFAMQ00059 246 aaKnown RBP15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 IQCEQ6IPM2 695 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 WDR59Q6PJI9 974 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 TRAF7Q6Q0C0 670 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 ENOSF1Q7L5Y1 443 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 TRAPPC11Q7Z392 1133 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 EFCAB13Q8IY85 973 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 HACE1Q8IYU2 909 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 KIAA1524Q8TCG1 905 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 MTMR12Q9C0I1 747 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 DNAH12Q6ZR08 3092 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 VNN1O95497 513 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 HLA-DRAP01903 254 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 SELPP16109 830 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 CD52P31358 61 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 PIK3CAP42336 1068 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 RAB27AP51159 221 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 GCNT1Q02742 428 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 RAPGEF1Q13905 1077 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 SMYD5Q6GMV2 418 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 JADE1Q6IE81 842 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 ALKAL1Q6UXT8 129 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 SNX27Q96L92 541 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 IMPG2Q9BZV3 1241 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 NXF3Q9H4D5 531 aaKnown RBP15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 UBE2TQ9NPD8 197 aaPredicted RBP15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 FAM105AQ9NUU6 356 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 IPPQ9Y573 584 aa15.34■□□□□ 0.05
CLTCL1-212ENST00000622493 DCDC2CA8MYV0 355 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 MEFVO15553 781 aaPredicted RBP15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 ZNF500O60304 480 aaPredicted RBP15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 CCDC172P0C7W6 258 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 SKIP12755 728 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 STAT1P42224 750 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 MFAP3P55082 362 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 TRPC3Q13507 836 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 NCOA4Q13772 614 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 TMEM132DQ14C87 1099 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 RALGAPA2Q2PPJ7 1873 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 LRRC8DQ7L1W4 858 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 CCDC170Q8IYT3 715 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 SMG8Q8ND04 991 aaKnown RBP15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 TMEM106CQ9BVX2 250 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 C1orf112Q9NSG2 853 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 CNTN3Q9P232 1028 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 PYCARDQ9ULZ3 195 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 PCDHB2Q9Y5E7 798 aa15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 BZW2Q9Y6E2 419 aaKnown RBP15.33■□□□□ 0.04
CLTCL1-212ENST00000622493 F8VZ95 297 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 PQBP1O60828 265 aaKnown RBP15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 ZNF623O75123 536 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 LRRN2O75325 713 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 RECQL4O94761 1208 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 PARNO95453 639 aaKnown RBP15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 SERPING1P05155 500 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 NFICP08651 508 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 DRAP1Q14919 205 aaPredicted RBP15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 SGSM1Q2NKQ1 1148 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 XKR4Q5GH76 650 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 GJB7Q6PEY0 223 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 PPM1KQ8N3J5 372 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 HELQQ8TDG4 1101 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 TAF4BQ92750 862 aa15.32■□□□□ 0.04
CLTCL1-212ENST00000622493 JAKMIP2Q96AA8 810 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms