RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PARP2Q9UGN5 583 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 SH3PXD2BA1X283 911 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 FAM205CA6NFA0 338 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 A8MXQ7 604 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 VILLO15195 856 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 RIPK2O43353 540 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 KDM1AO60341 852 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 CLPTM1O96005 669 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 PHBP35232 272 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 RXRGP48443 463 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 KLRC3Q07444 240 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 CDC16Q13042 620 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 PTGDRQ13258 359 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 PDE1CQ14123 709 aaPredicted RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 KIAA1755Q5JYT7 1200 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 NEPROQ6NW34 567 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 PACS1Q6VY07 963 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 PASD1Q8IV76 773 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 MIPEPQ99797 713 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 TPK1Q9H3S4 243 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 ZHX3Q9H4I2 956 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 EBF3Q9H4W6 596 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 TUT1Q9H6E5 874 aaKnown RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 COPRSQ9NQ92 184 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 ZDHHC18Q9NUE0 388 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 MYO5AQ9Y4I1 1855 aaKnown RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 CCDC162PA2VCL2 907 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 FAM187AA6NFU0 413 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 B4E1Z4 1266 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 ZNF862O60290 1169 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 FGGP02679 453 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 ANPEPP15144 967 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 CRABP2P29373 138 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 TCF7P36402 384 aaPredicted RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 DNAJC3Q13217 504 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 CAMK2BQ13554 666 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 SLC18A3Q16572 532 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 RTN1Q16799 776 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 RABL6Q3YEC7 729 aaPredicted RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 DUPD1Q68J44 220 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 ANKRD40Q6AI12 368 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 ADAT2Q7Z6V5 191 aaKnown RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 U2AF1L4Q8WU68 220 aaKnown RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 HEPHQ9BQS7 1158 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 PACSIN1Q9BY11 444 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 ARMCX3Q9UH62 379 aaPredicted RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 ADAMTS1Q9UHI8 967 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 ASAP1Q9ULH1 1129 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 SIK3Q9Y2K2 1263 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 TMA7Q9Y2S6 64 aaKnown RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 A0A1W2PRG0 241 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 GOLGA8TH3BQL2 631 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 WNT7AO00755 349 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 MGEA5O60502 916 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 CIB2O75838 187 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 GOLGA8HP0CJ92 632 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 KRT13P13646 458 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 EIF2B2P49770 351 aaKnown RBP8.38□□□□□ -1.07
VPS11-209ENST00000622309 TNFAIP8L3Q5GJ75 292 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 ANO5Q75V66 913 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 RSPH3Q86UC2 560 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 PLEKHO2Q8TD55 490 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 SCYL1Q96KG9 808 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 COX4I2Q96KJ9 171 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 SERPINB12Q96P63 405 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 ANKRD2Q9GZV1 360 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 PLGRKTQ9HBL7 147 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 KMT5AQ9NQR1 393 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 FAM217BQ9NTX9 383 aaPredicted RBP8.38□□□□□ -1.07
VPS11-209ENST00000622309 CAMTA1Q9Y6Y1 1673 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 RPTORQ8N122 1335 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 PCDH11YQ9BZA8 1340 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 TRMUO75648 421 aaKnown RBP8.38□□□□□ -1.07
VPS11-209ENST00000622309 INMTO95050 263 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 HSPA8P11142 646 aaKnown RBP8.38□□□□□ -1.07
VPS11-209ENST00000622309 EEF2P13639 858 aaKnown RBP8.38□□□□□ -1.07
VPS11-209ENST00000622309 KRT2P35908 639 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 EPS15P42566 896 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 CHN2P52757 468 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 KLHL30Q0D2K2 578 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 MMEL1Q495T6 779 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 TTC38Q5R3I4 469 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 SYCP2LQ5T4T6 812 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 LRP10Q7Z4F1 713 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 BAP1Q92560 729 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 USP6NLQ92738 828 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 GLG1Q92896 1179 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 FHDC1Q9C0D6 1143 aaPredicted RBP8.38□□□□□ -1.07
VPS11-209ENST00000622309 PARVBQ9HBI1 364 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 DMTF1Q9Y222 760 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 TELO2Q9Y4R8 837 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 MYH6P13533 1939 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 C5P01031 1676 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 DNAJC6O75061 913 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 FOXN2P32314 431 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 PGM1P36871 562 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 ERFP50548 548 aa8.38□□□□□ -1.07
VPS11-209ENST00000622309 PTPN12Q05209 780 aaKnown RBP8.38□□□□□ -1.07
VPS11-209ENST00000622309 RAPGEF1Q13905 1077 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms