RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	HELZ	P42694	1942 aa	Known RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	SMIM28	A0A1B0GU29	152 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	CCDC195	A0A1B0GUA6	201 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	TMEM221	A6NGB7	291 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	LACTBL1	A8MY62	500 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	LOC730098	B7Z3J9	87 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	PI4K2B	G5E9Z4	385 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171		M0R296	226 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	PODXL	O00592	558 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	HNRNPDL	O14979	420 aa	Known RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	HCRT	O43612	131 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	B3GAT3	O94766	335 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	CFH	P08603	1231 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	SRGAP2B	P0DMP2	458 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	PLS3	P13797	630 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	MCM4	P33991	863 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	OR1D2	P34982	312 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	STAT6	P42226	847 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	ACOT2	P49753	483 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	YARS	P54577	528 aa	Known RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	CDC42EP1	Q00587	391 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	STRN3	Q13033	797 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	ORC2	Q13416	577 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	GIT2	Q14161	759 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	PDIA5	Q14554	519 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	FAM187B	Q17R55	369 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	DCAF4L1	Q3SXM0	396 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	KIAA0319	Q5VV43	1072 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	CES5A	Q6NT32	575 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	MPZL3	Q6UWV2	235 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	CD300LG	Q6UXG3	332 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	HAUS6	Q7Z4H7	955 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	BRAP	Q7Z569	592 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	EXOC8	Q8IYI6	725 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	HACE1	Q8IYU2	909 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	TTC9B	Q8N6N2	239 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	SYT2	Q8N9I0	419 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	TTC16	Q8NEE8	873 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	FLCN	Q8NFG4	579 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	SLC7A14	Q8TBB6	771 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	LARP4B	Q92615	738 aa	Known RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	DHX58	Q96C10	678 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZNF707	Q96C28	371 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	CCDC51	Q96ER9	411 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	KIF12	Q96FN5	646 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	DRC1	Q96MC2	740 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	PPP1R10	Q96QC0	940 aa	Known RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	KXD1	Q9BQD3	176 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	CLSTN3	Q9BQT9	956 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	TMEM175	Q9BSA9	504 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	RPP25	Q9BUL9	199 aa	Known RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	CCDC94	Q9BW85	323 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	TRAIP	Q9BWF2	469 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	COLEC11	Q9BWP8	271 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	EMILIN2	Q9BXX0	1053 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	NFKBIZ	Q9BYH8	718 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	BLZF1	Q9H2G9	400 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	PCIF1	Q9H4Z3	704 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	SFXN1	Q9H9B4	322 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	GDPD2	Q9HCC8	539 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	RNF216	Q9NWF9	866 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	FAM50B	Q9Y247	325 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	TNFSF13B	Q9Y275	285 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	CDY1	Q9Y6F8	540 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	CLUH	O75153	1309 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	FRYL	O94915	3013 aa		4.88	□□□□□ -1.63
LINC00649-219	ENST00000622171	FAM186A	A6NE01	2351 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	SPTBN2	O15020	2390 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	RALGAPA1	Q6GYQ0	2036 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	COL4A2	P08572	1712 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	WDR27	A2RRH5	827 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	LAD1	O00515	517 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	SPTLC1	O15269	473 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	NCK2	O43639	380 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	LILRB3	O75022	631 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	LRRN2	O75325	713 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	NR1I2	O75469	434 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	PRPF6	O94906	941 aa	Known RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	CLSTN1	O94985	981 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	GCNT3	O95395	438 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	SEC24A	O95486	1093 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	ADH1A	P07327	375 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	C8A	P07357	584 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	XRCC6	P12956	609 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	CPB1	P15086	417 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	CEBPB	P17676	345 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	GUCY2C	P25092	1073 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	LONP1	P36776	959 aa	Known RBP	4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	GRM5	P41594	1212 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	AFM	P43652	599 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	MCM2	P49736	904 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	EFNA5	P52803	228 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	NCKAP1L	P55160	1127 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZXDA	P98168	799 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	ROR1	Q01973	937 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	DSG1	Q02413	1049 aa		4.87	□□□□□ -1.63
LINC00649-219	ENST00000622171	DNM1	Q05193	864 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms