RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CPLX4Q7Z7G2 160 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 REPS2Q8NFH8 660 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 MDM1Q8TC05 714 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 POMGNT1Q8WZA1 660 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 ZNF516Q92618 1163 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 CABS1Q96KC9 395 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 CEP170P1Q96L14 293 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 SERPINB12Q96P63 405 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 POP1Q99575 1024 aaKnown RBP10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 SH2D3AQ9BRG2 576 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 DCLK3Q9C098 648 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 KDM4CQ9H3R0 1056 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 RPAP3Q9H6T3 665 aaPredicted RBP10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 ACP6Q9NPH0 428 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 XPNPEP1Q9NQW7 623 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 AAASQ9NRG9 546 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 RNF146Q9NTX7 359 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 ARHGAP28Q9P2N2 729 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 GABBR1Q9UBS5 961 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 PCDHB2Q9Y5E7 798 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 MROH7Q68CQ1 1323 aa10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 COL11A1P12107 1806 aaPredicted RBP10.28□□□□□ -0.76
IGHV3-54-201ENST00000622166 TLDC2A0PJX2 215 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 VWA5AO00534 786 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 RASGRF2O14827 1237 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 TP73O15350 636 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 CLDN3O15551 220 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 SORBS3O60504 671 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 STAM2O75886 525 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 RASSF9O75901 435 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 PROSCO94903 275 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 C4BPAP04003 597 aaKnown RBP10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 KCNJ1P48048 391 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 KRT17Q04695 432 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 TNFAIP1Q13829 316 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 BAATQ14032 418 aaPredicted RBP10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 CNGA2Q16280 664 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 KCTD19Q17RG1 926 aaPredicted RBP10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 ZACNQ401N2 412 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 SGO2Q562F6 1265 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 ANKRD20A8PQ5CZ79 823 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 FBXW10Q5XX13 1052 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 ZNF772Q68DY9 489 aaPredicted RBP10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 CIAPIN1Q6FI81 312 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 NSMFQ6X4W1 530 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCDC13Q8IYE1 715 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCDC197Q8NCU1 140 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 GRK7Q8WTQ7 553 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCT6BQ92526 530 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 DDX27Q96GQ7 796 aaKnown RBP10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 SNF8Q96H20 258 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 VCPIP1Q96JH7 1222 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 CDHR1Q96JP9 859 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 IFT74Q96LB3 600 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 KIFC3Q9BVG8 833 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 OSBPL7Q9BZF2 842 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 ATP6V0A4Q9HBG4 840 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 MYOZ2Q9NPC6 264 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 HOMER2Q9NSB8 354 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 HOMER3Q9NSC5 361 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 C1orf112Q9NSG2 853 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 CHORDC1Q9UHD1 332 aaPredicted RBP10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 ANAPC7Q9UJX3 599 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 ADAMTS5Q9UNA0 930 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 CNTN6Q9UQ52 1028 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 PHIPQ8WWQ0 1821 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 ADGRA3Q8IWK6 1321 aa10.27□□□□□ -0.77
IGHV3-54-201ENST00000622166 LOC285556D6RIA3 1793 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 GOLGA6L7A0A1B0GV03 622 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 FAM170AA1A519 330 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 TESPA1A2RU30 521 aaPredicted RBP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCT8L1PA6NM43 557 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 SPATA31C2B4DYI2 1134 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 PSTPIP1O43586 416 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 DNAJC8O75937 253 aaPredicted RBP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 HLA-DRAP01903 254 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 KRT5P13647 590 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 DPEP1P16444 411 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 ACO1P21399 889 aaKnown RBP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 PPP1R7Q15435 360 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 XKR3Q5GH77 459 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 WDR44Q5JSH3 913 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 UBAP2Q5T6F2 1119 aaKnown RBP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 LIN9Q5TKA1 542 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 ABHD15Q6UXT9 468 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 MON1BQ7L1V2 547 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 TAOK1Q7L7X3 1001 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 PHF13Q86YI8 300 aaPredicted RBP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 RELL1Q8IUW5 271 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 KATNAL2Q8IYT4 538 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 BBOF1Q8ND07 529 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 ATL2Q8NHH9 583 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 EPS8L3Q8TE67 593 aaKnown RBP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 NSUN6Q8TEA1 469 aaKnown RBP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 C1orf54Q8WWF1 131 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 ATG4CQ96DT6 458 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 C12orf42Q96LP6 360 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 SELENOSQ9BQE4 189 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 FOXP3Q9BZS1 431 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 POLR3FQ9H1D9 316 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms