RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MICAL1Q8TDZ2 1067 aa16.81■□□□□ 0.28
NPHP4-211ENST00000622020 CKAP2Q8WWK9 683 aa16.81■□□□□ 0.28
NPHP4-211ENST00000622020 ZNF570Q96NI8 536 aa16.81■□□□□ 0.28
NPHP4-211ENST00000622020 TMX4Q9H1E5 349 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-211ENST00000622020 CCDC134Q9H6E4 229 aa16.81■□□□□ 0.28
NPHP4-211ENST00000622020 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.81■□□□□ 0.28
NPHP4-211ENST00000622020 SUGT1Q9Y2Z0 365 aa16.81■□□□□ 0.28
NPHP4-211ENST00000622020 H0Y3Z8 333 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 CFHP08603 1231 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 ADSSP30520 456 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 HADHBP55084 474 aaKnown RBP16.8■□□□□ 0.28
NPHP4-211ENST00000622020 NFIL3Q16649 462 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 ZNF365Q70YC5 407 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 VSIG1Q86XK7 387 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 GLIS1Q8NBF1 620 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 SPIRE2Q8WWL2 714 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 ACSF2Q96CM8 615 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-211ENST00000622020 SERPINB12Q96P63 405 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 ROPN1BQ9BZX4 212 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-211ENST00000622020 ROPN1Q9HAT0 212 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-211ENST00000622020 USP21Q9UK80 565 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 GTF3C4Q9UKN8 822 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 GGPS1O95749 300 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 OAS1P00973 400 aaKnown RBP16.8■□□□□ 0.28
NPHP4-211ENST00000622020 ETS1P14921 441 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 IVDP26440 423 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 GBP1P32455 592 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 UGCGQ16739 394 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 TMEM109Q9BVC6 243 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 TMEM206Q9H813 350 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 HAO1Q9UJM8 370 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 KIF13BQ9NQT8 1826 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 CYP1A2P05177 515 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 GZMAP12544 262 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 KRT10P13645 584 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 RARRES1P49788 294 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 CDR2Q01850 454 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 VPS72Q15906 364 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 ANKS1BQ7Z6G8 1248 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 FMNL3Q8IVF7 1028 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 ANKLE1Q8NAG6 615 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 ERP27Q96DN0 273 aa16.8■□□□□ 0.28
NPHP4-211ENST00000622020 NOP53Q9NZM5 478 aaKnown RBP16.8■□□□□ 0.28
NPHP4-211ENST00000622020 WDR91A4D1P6 747 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 GOLGA8SH3BPF8 625 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 GOLGA8MH3BSY2 632 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 GAS8O95995 478 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 MYBL1P10243 752 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 ITIH2P19823 946 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 PSMC4P43686 418 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 SPP2Q13103 211 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 GALNTL6Q49A17 601 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 IZUMO3Q5VZ72 239 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 SPOPLQ6IQ16 392 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 CROCCP2Q86T23 111 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 SLC9A9Q8IVB4 645 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
NPHP4-211ENST00000622020 STRA6Q9BX79 667 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 EBF2Q9HAK2 575 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 COL20A1Q9P218 1284 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 PIK3CDO00329 1044 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 FSCN2O14926 492 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 DGKZQ13574 1117 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 FASTKD3Q14CZ7 662 aaKnown RBP16.79■□□□□ 0.28
NPHP4-211ENST00000622020 XKR9Q5GH70 373 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 LDHDQ86WU2 507 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 HELQQ8TDG4 1101 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 SHC3Q92529 594 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 SPDL1Q96EA4 605 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 C11orf70Q9BRQ4 267 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 ADAM22Q9P0K1 906 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 WHRNQ9P202 907 aa16.79■□□□□ 0.28
NPHP4-211ENST00000622020 BTAF1O14981 1849 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 NFIBO00712 420 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 BANF1O75531 89 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 MYCLP12524 364 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-211ENST00000622020 PLS3P13797 630 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 P3H1Q32P28 736 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 KRT39Q6A163 491 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 ACAD10Q6JQN1 1059 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 RHBDF2Q6PJF5 856 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 NT5C1BQ96P26 610 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 DCLK3Q9C098 648 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 MYLK2Q9H1R3 596 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 C12orf65Q9H3J6 166 aaKnown RBP16.78■□□□□ 0.28
NPHP4-211ENST00000622020 RXFP1Q9HBX9 757 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 NRAPQ86VF7 1730 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 VIL1P09327 827 aaKnown RBP16.78■□□□□ 0.28
NPHP4-211ENST00000622020 KRT15P19012 456 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 EIF2AK2P19525 551 aaKnown RBP16.78■□□□□ 0.28
NPHP4-211ENST00000622020 RFX1P22670 979 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 CNGA1P29973 690 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 YWHABP31946 246 aaKnown RBP16.78■□□□□ 0.28
NPHP4-211ENST00000622020 WDR4P57081 412 aaKnown RBP16.78■□□□□ 0.28
NPHP4-211ENST00000622020 TMEM63BQ5T3F8 832 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 BZW1Q7L1Q6 419 aaKnown RBP16.78■□□□□ 0.28
NPHP4-211ENST00000622020 RBM15Q96T37 977 aaKnown RBP eCLIP16.78■□□□□ 0.28
NPHP4-211ENST00000622020 SAYSD1Q9NPB0 183 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 RAB20Q9NX57 234 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 NKX1-2Q9UD57 310 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms