RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 ZNF394Q53GI3 561 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 PI16Q6UXB8 463 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 LCORLQ8N3X6 602 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 ATP11CQ8NB49 1132 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 AIFM3Q96NN9 605 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 RAD21L1Q9H4I0 556 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 AFF4Q9UHB7 1163 aaKnown RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 SLC12A6Q9UHW9 1150 aa10.42□□□□□ -0.74
COL4A6-210ENST00000621266 ZMYND8Q9ULU4 1186 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-210ENST00000621266 FAM187AA6NFU0 413 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 LGALS16A8MUM7 142 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 SRP72O76094 671 aaKnown RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 PLA2G4BP0C869 781 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 LRRC31Q6UY01 552 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 C11orf74Q86VG3 221 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 ZNF564Q8TBZ8 553 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 KCNK16Q96T55 309 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 OSBPL5Q9H0X9 879 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 NOL6Q9H6R4 1146 aaKnown RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 TMEM206Q9H813 350 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 EML4Q9HC35 981 aaKnown RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 CDC42BPAQ5VT25 1732 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 RNF103O00237 685 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 SRGAP2CP0DJJ0 459 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 TRIP4Q15650 581 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 TRIM71Q2Q1W2 868 aaKnown RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 EGFL8Q99944 293 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 OSBPL10Q9BXB5 764 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 RMI1Q9H9A7 625 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 TRIM39Q9HCM9 518 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 HSPBP1Q9NZL4 362 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 OTUD4Q01804 1114 aaKnown RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 RHPN2Q8IUC4 686 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 MICALL2Q8IY33 904 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 TRIM51Q9BSJ1 452 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 RERGLQ9H628 205 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 ADAM22Q9P0K1 906 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 DTNAQ9Y4J8 743 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 CRB1P82279 1406 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 hCG_1984214I3L0E3 225 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 TEX33O43247 280 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 CYTH3O43739 400 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 CDC27P30260 824 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 BYSLQ13895 437 aaKnown RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 RESP18Q5W5W9 173 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 APOBEC3FQ8IUX4 373 aaKnown RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 ZNF713Q8N859 430 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 OSBP2Q969R2 916 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 IRX2Q9BZI1 471 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 ARHGEF3Q9NR81 526 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 E2F8A0AVK6 867 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 PRR29P0C7W0 189 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 LRRC63Q05C16 580 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 RSBN1Q5VWQ0 802 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 MIS18BP1Q6P0N0 1132 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 FGD2Q7Z6J4 655 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 FAM162AQ96A26 154 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 COA1Q9GZY4 146 aa10.41□□□□□ -0.74
COL4A6-210ENST00000621266 PUS7LQ9H0K6 701 aaKnown RBP10.41□□□□□ -0.74
COL4A6-210ENST00000621266 STX3Q13277 289 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 FAM153AQ9UHL3 310 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 PRKAB2O43741 272 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 TOMM70O94826 608 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 CDH2P19022 906 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-210ENST00000621266 BFSP2Q13515 415 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 WLSQ5T9L3 541 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 POTEAQ6S8J7 498 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 SH3RF3Q8TEJ3 882 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-210ENST00000621266 GCOM2Q9BZD3 368 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-210ENST00000621266 VIPAS39Q9H9C1 493 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 ZNF556Q9HAH1 456 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 NRBP2Q9NSY0 501 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 NARFQ9UHQ1 456 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 E5RI56 91 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 INO80B-WBP1J3KQ70 363 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 ASNA1O43681 348 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 MYL1P05976 194 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 DPEP1P16444 411 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 SSTR3P32745 418 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-210ENST00000621266 RASGRF1Q13972 1273 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 PTGISQ16647 500 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 ZNF746Q6NUN9 644 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-210ENST00000621266 C1orf228Q6PIY5 440 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 INO80BQ9C086 356 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-210ENST00000621266 ZFYVE1Q9HBF4 777 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 MRGBPQ9NV56 204 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 IL1RAPL1Q9NZN1 696 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 PCSK1NQ9UHG2 260 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 MAD2L2Q9UI95 211 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 USP1O94782 785 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 MFN2O95140 757 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 ARSEP51690 589 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 KYNUQ16719 465 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 COBLL1Q53SF7 1204 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 LAYNQ6UX15 382 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 MDM1Q8TC05 714 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 PDCD6IPQ8WUM4 868 aaKnown RBP10.4□□□□□ -0.74
COL4A6-210ENST00000621266 IFT43Q96FT9 208 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 NSL1Q96IY1 281 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms