RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 PLS3P13797 630 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 ORC1Q13415 861 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 SMAD1Q15797 465 aaKnown RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 BSPRYQ5W0U4 402 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 KRT39Q6A163 491 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 LRRC31Q6UY01 552 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 GBP7Q8N8V2 638 aaPredicted RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 ETNPPLQ8TBG4 499 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 ARHGEF26Q96DR7 871 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 RANBP17Q9H2T7 1088 aaKnown RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 SPC25Q9HBM1 224 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 INTS9Q9NV88 658 aaKnown RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 ROBO3Q96MS0 1386 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 UTRNP46939 3433 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 IGKV6D-41A0A0C4DH26 115 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 M0QZ92 97 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 MAP2K7O14733 419 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 DGAT1O75907 488 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 ECEL1O95672 775 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 MMEP08473 750 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 SKIP12755 728 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 HOXA7P31268 230 aaPredicted RBP9.66□□□□□ -0.86
GGA3-222ENST00000621217 STX2P32856 288 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 NPTX2P47972 431 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 RWDD2BP57060 319 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 MYO1EQ12965 1108 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 PDCD2Q16342 344 aaPredicted RBP9.66□□□□□ -0.86
GGA3-222ENST00000621217 PARP9Q8IXQ6 854 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 NEK9Q8TD19 979 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 KCTD10Q9H3F6 313 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 SUCLA2Q9P2R7 463 aaPredicted RBP9.66□□□□□ -0.86
GGA3-222ENST00000621217 PASKQ96RG2 1323 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 NOL4O94818 638 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 C6orf222P0C671 652 aaPredicted RBP9.66□□□□□ -0.86
GGA3-222ENST00000621217 ATF2P15336 505 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 TFDP1Q14186 410 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 Q4G0T1 1027 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 GLE1Q53GS7 698 aaKnown RBP9.66□□□□□ -0.86
GGA3-222ENST00000621217 SPOPLQ6IQ16 392 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 SLC47A2Q86VL8 602 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 ARHGEF19Q8IW93 802 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 ATG4AQ8WYN0 398 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 KLRG1Q96E93 195 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 ZMAT2Q96NC0 199 aaKnown RBP9.66□□□□□ -0.86
GGA3-222ENST00000621217 TTYH3Q9C0H2 523 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 ADAM22Q9P0K1 906 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 SEL1LQ9UBV2 794 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 ASTN1O14525 1302 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 F8VZ95 297 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 CCDC188H7C350 402 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 FDX1P10109 184 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 HNRNPH1P31943 449 aaKnown RBP9.66□□□□□ -0.86
GGA3-222ENST00000621217 SESN3P58005 492 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 UGCGQ16739 394 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 CDO1Q16878 200 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 FKBP1CQ5VVH2 108 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 DAB2IPQ5VWQ8 1189 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 CCDC60Q8IWA6 550 aaPredicted RBP9.66□□□□□ -0.86
GGA3-222ENST00000621217 RHOT2Q8IXI1 618 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 FBXL13Q8NEE6 735 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 FAM149B1Q96BN6 582 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 C18orf8Q96DM3 657 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 ZBTB45Q96K62 511 aaPredicted RBP9.66□□□□□ -0.86
GGA3-222ENST00000621217 ZWILCHQ9H900 591 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 TTLL3Q9Y4R7 772 aa9.66□□□□□ -0.86
GGA3-222ENST00000621217 C4BP0C0L5 1744 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 GJB1P08034 283 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 MEI1Q5TIA1 1274 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 ANKRD20A3Q5VUR7 823 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 GPRC5AQ8NFJ5 357 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 TAS1R2Q8TE23 839 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 ABTB1Q969K4 478 aaPredicted RBP9.65□□□□□ -0.86
GGA3-222ENST00000621217 RPF1Q9H9Y2 349 aaKnown RBP9.65□□□□□ -0.86
GGA3-222ENST00000621217 INPP5FQ9Y2H2 1132 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 H0YCG3 227 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 MEFVO15553 781 aaPredicted RBP9.65□□□□□ -0.86
GGA3-222ENST00000621217 ZNF286BP0CG31 522 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 CDK17Q00537 523 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 ITGB3BPQ13352 177 aaPredicted RBP9.65□□□□□ -0.86
GGA3-222ENST00000621217 FAM133BQ5BKY9 247 aaKnown RBP9.65□□□□□ -0.86
GGA3-222ENST00000621217 HGSNATQ68CP4 663 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 SLC30A9Q6PML9 568 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 PPP1R21Q6ZMI0 780 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.65□□□□□ -0.86
GGA3-222ENST00000621217 TBC1D1Q86TI0 1168 aaPredicted RBP9.65□□□□□ -0.86
GGA3-222ENST00000621217 ZSWIM2Q8NEG5 633 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 CALR3Q96L12 384 aaKnown RBP9.65□□□□□ -0.86
GGA3-222ENST00000621217 ATP6V1G3Q96LB4 118 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 MAK16Q9BXY0 300 aaKnown RBP9.65□□□□□ -0.86
GGA3-222ENST00000621217 CYP26B1Q9NR63 512 aa9.65□□□□□ -0.86
GGA3-222ENST00000621217 DBR1Q9UK59 544 aaKnown RBP9.65□□□□□ -0.86
GGA3-222ENST00000621217 WDR91A4D1P6 747 aa9.65□□□□□ -0.87
GGA3-222ENST00000621217 SGK1O00141 431 aa9.65□□□□□ -0.87
GGA3-222ENST00000621217 SLC16A3O15427 465 aaKnown RBP9.65□□□□□ -0.87
GGA3-222ENST00000621217 ERVK-9P63128 1117 aa9.65□□□□□ -0.87
GGA3-222ENST00000621217 CUL1Q13616 776 aa9.65□□□□□ -0.87
GGA3-222ENST00000621217 WDR72Q3MJ13 1102 aa9.65□□□□□ -0.87
GGA3-222ENST00000621217 PRAMEF19Q5SWL8 479 aa9.65□□□□□ -0.87
GGA3-222ENST00000621217 EFCAB12Q6NXP0 572 aa9.65□□□□□ -0.87
GGA3-222ENST00000621217 CCDC13Q8IYE1 715 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms