RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 NPDC1Q9NQX5 325 aaPredicted RBP7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 TBC1D22BQ9NU19 505 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 KCNH4Q9UQ05 1017 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 INPP5FQ9Y2H2 1132 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ARHGEF35A5YM69 484 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ATP9BO43861 1147 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 OATP04181 439 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 CETPP11597 493 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ITGA4P13612 1032 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 SPIRE1Q08AE8 756 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 DHX34Q14147 1143 aaKnown RBP7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 EPHA7Q15375 998 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 STXBP2Q15833 593 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ARHGAP44Q17R89 818 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 KNOP1Q1ED39 458 aaKnown RBP7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 EMC10Q5UCC4 262 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 VSIG10LQ86VR7 867 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 RIOX2Q8IUF8 465 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 GLIS3Q8NEA6 775 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 PXYLP1Q8TE99 480 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 SCFD2Q8WU76 684 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 RFFLQ8WZ73 363 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 NACC1Q96RE7 527 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 NEUROD4Q9HD90 331 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 KLHL14Q9P2G3 628 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 UBIAD1Q9Y5Z9 338 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ATP2A1O14983 1001 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 NKRFO15226 690 aaKnown RBP eCLIP7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ATP9AO75110 1047 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 CAND2O75155 1236 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 DNAJC8O75937 253 aaPredicted RBP7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 AGTP01019 485 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 GSTA1P08263 222 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 SPATA31C1P0DKV0 1188 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ZKSCAN8Q15776 578 aaPredicted RBP7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ZFYVE27Q5T4F4 411 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 TRPM8Q7Z2W7 1104 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 THOC1Q96FV9 657 aaKnown RBP7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ERP44Q9BS26 406 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 OSBPL7Q9BZF2 842 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 AGO4Q9HCK5 861 aaKnown RBP7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ASIC3Q9UHC3 531 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 PASKQ96RG2 1323 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 SFI1A8K8P3 1242 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 BTNL10A8MVZ5 291 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 PODXLO00592 558 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 ZBTB39O15060 712 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 SLITRK3O94933 977 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 ATP6V1G2O95670 118 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 PGK2P07205 417 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 STX2P32856 288 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 GJA5P36382 358 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 GTF2A2P52657 109 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 GALCP54803 685 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 ITIH4Q14624 930 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 ZRSR2Q15696 482 aaKnown RBP7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 SEPT7Q16181 437 aaKnown RBP7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 Q3C1V9 767 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 FOXR2Q6PJQ5 311 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 APBB1IPQ7Z5R6 666 aaPredicted RBP7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 MIEF2Q96C03 454 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 PRMT1Q99873 361 aaKnown RBP7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 LXNQ9BS40 222 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 POLR3CQ9BUI4 534 aaPredicted RBP7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 PABPC3Q9H361 631 aaKnown RBP7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 SLC12A6Q9UHW9 1150 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 INTUQ9ULD6 942 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 SYNGAP1Q96PV0 1343 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 PDHXO00330 501 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 DNM1LO00429 736 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 CLIC2O15247 247 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 HIP1RO75146 1068 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 LUC7L3O95232 432 aaKnown RBP7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 SLC25A27O95847 323 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 BCRP11274 1271 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 CYP11B2P19099 503 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 PPP2R5CQ13362 524 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 NUGGCQ68CJ6 796 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 SFR1Q86XK3 245 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 VSIG1Q86XK7 387 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 FAM186BQ8IYM0 893 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 CDHR1Q96JP9 859 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 SH2D3AQ9BRG2 576 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 TXNRD2Q9NNW7 524 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 TUFT1Q9NNX1 390 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 BATF3Q9NR55 127 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 IGSF5Q9NSI5 407 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 RBPJLQ9UBG7 517 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 PTPN22Q9Y2R2 807 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 MYH7BA7E2Y1 1941 aa7.46□□□□□ -1.21
SRGAP3-213ENST00000618999 NOL4O94818 638 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 EYA4O95677 639 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 NR3C1P04150 777 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 P4HBP07237 508 aaKnown RBP7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 DRD4P21917 467 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 PEX19P40855 299 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 ZNF157P51786 506 aaPredicted RBP7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 CCNA1P78396 465 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 XRCC4Q13426 336 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 UAP1Q16222 522 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms