RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 MXI1P50539 228 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 PMS2P54278 862 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 PEX3P56589 373 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 ACTN3Q08043 901 aaPredicted RBP4.64□□□□□ -1.67
SEC22B-202ENST00000618538 SF3A3Q12874 501 aaKnown RBP eCLIP4.64□□□□□ -1.67
SEC22B-202ENST00000618538 MTMR3Q13615 1198 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 MYBPC2Q14324 1141 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 RASA3Q14644 834 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 SNRNP35Q16560 246 aaKnown RBP4.64□□□□□ -1.67
SEC22B-202ENST00000618538 ERMARDQ5T6L9 678 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 ICE2Q659A1 982 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 SMYD5Q6GMV2 418 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 MMS22LQ6ZRQ5 1243 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 YTHDF3Q7Z739 585 aaKnown RBP4.64□□□□□ -1.67
SEC22B-202ENST00000618538 RHOT2Q8IXI1 618 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 CCDC13Q8IYE1 715 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 XXYLT1Q8NBI6 393 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 TMEM161BQ8NDZ6 487 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 CCDC26Q8TAB7 109 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 PARD3BQ8TEW8 1205 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 CHURC1Q8WUH1 139 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 ATG4AQ8WYN0 398 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 CCDC127Q96BQ5 260 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 THAP11Q96EK4 314 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 ZBED3Q96IU2 234 aaPredicted RBP4.64□□□□□ -1.67
SEC22B-202ENST00000618538 SEC16BQ96JE7 1060 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 PWWP2AQ96N64 755 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 XPO6Q96QU8 1125 aaKnown RBP4.64□□□□□ -1.67
SEC22B-202ENST00000618538 PSMD1Q99460 953 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 PI4K2AQ9BTU6 479 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 DDX23Q9BUQ8 820 aaKnown RBP4.64□□□□□ -1.67
SEC22B-202ENST00000618538 NUP85Q9BW27 656 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 ZNF341Q9BYN7 854 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 PABPC3Q9H361 631 aaKnown RBP4.64□□□□□ -1.67
SEC22B-202ENST00000618538 ST6GALNAC4Q9H4F1 302 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 AZI2Q9H6S1 392 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 EFCC1Q9HA90 598 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 VEZTQ9HBM0 779 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 RAVER2Q9HCJ3 691 aaKnown RBP4.64□□□□□ -1.67
SEC22B-202ENST00000618538 PCYOX1Q9UHG3 505 aa4.64□□□□□ -1.67
SEC22B-202ENST00000618538 MROH7Q68CQ1 1323 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 LCTP09848 1927 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 CLDN3O15551 220 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 RIPK2O43353 540 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 RASSF9O75901 435 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 EDN1P05305 212 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 DLATP10515 647 aaKnown RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 MAPTP10636 758 aaKnown RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 CYP11B1P15538 503 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 CHN1P15882 459 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 IVDP26440 423 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 COILP38432 576 aaPredicted RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 MMP13P45452 471 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 SLCO1A2P46721 670 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 QARSP47897 775 aaKnown RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 NPTX2P47972 431 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 DRG2P55039 364 aaKnown RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 RPS6P62753 249 aaKnown RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 GPC5P78333 572 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 MAP3K10Q02779 954 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 MTMR1Q13613 665 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 DHX34Q14147 1143 aaKnown RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 PGM5Q15124 567 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 CCDC38Q502W7 563 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 ANKRD20A8PQ5CZ79 823 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 PCNX4Q63HM2 1172 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 LMBRD2Q68DH5 695 aaPredicted RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 RHBDF2Q6PJF5 856 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 CCDC137Q6PK04 289 aaKnown RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 B4GALNT4Q76KP1 1039 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 PHLDB2Q86SQ0 1253 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 PRUNE1Q86TP1 453 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 FAM160B2Q86V87 743 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 FAM228AQ86W67 206 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 SLC13A5Q86YT5 568 aaPredicted RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 MAP4K3Q8IVH8 894 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 SUGP1Q8IWZ8 645 aaKnown RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 CPXCR1Q8N123 301 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 PPM1KQ8N3J5 372 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 ZNF564Q8TBZ8 553 aaPredicted RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 NEK9Q8TD19 979 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 ZNF526Q8TF50 670 aaPredicted RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 CCT6BQ92526 530 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 HPS1Q92902 700 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 ART4Q93070 314 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 PGM2Q96G03 612 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 TEPSINQ96N21 525 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 ACCSQ96QU6 501 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 RPS6KC1Q96S38 1066 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 FAM129AQ9BZQ8 928 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 HAPLN2Q9GZV7 340 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 RAB17Q9H0T7 212 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 XPNPEP1Q9NQW7 623 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 ZNF277Q9NRM2 450 aaPredicted RBP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 CHST7Q9NS84 486 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.63□□□□□ -1.67
SEC22B-202ENST00000618538 CTNNAL1Q9UBT7 734 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 FEM1BQ9UK73 627 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 TBX20Q9UMR3 447 aa4.63□□□□□ -1.67
SEC22B-202ENST00000618538 R3HDM2Q9Y2K5 976 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms