RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SOCS7O14512 581 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 GJB6O95452 261 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 CST3P01034 146 aaPredicted RBP13.3□□□□□ -0.28
CIITA-212ENST00000618207 EDNRBP24530 442 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 GJC1P36383 396 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 FLT3P36888 993 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 ZACNQ401N2 412 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 SH2D3CQ8N5H7 860 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 OR2W6PQ8NHA6 318 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 CYFIP2Q96F07 1278 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 IGKV6D-21A0A0A0MT36 114 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 TCRBV7S2A1N4TA0A589 114 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 H0YCG3 227 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 B4GALT5O43286 388 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 ADCY3O60266 1144 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 C4BPAP04003 597 aaKnown RBP13.3□□□□□ -0.28
CIITA-212ENST00000618207 GJA5P36382 358 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 PSMD6Q15008 389 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 SCARA5Q6ZMJ2 495 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 TMEM174Q8WUU8 243 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 DDX1Q92499 740 aaKnown RBP13.3□□□□□ -0.28
CIITA-212ENST00000618207 GPR20Q99678 358 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 NIFKQ9BYG3 293 aaKnown RBP13.3□□□□□ -0.28
CIITA-212ENST00000618207 MTMR12Q9C0I1 747 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 ANAPC7Q9UJX3 599 aa13.3□□□□□ -0.28
CIITA-212ENST00000618207 PYGMP11217 842 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 RRM1P23921 792 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 LAMTOR4Q0VGL1 99 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 TARBP2Q15633 366 aaKnown RBP13.29□□□□□ -0.28
CIITA-212ENST00000618207 CFAP58Q5T655 872 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 MAP1SQ66K74 1059 aaPredicted RBP13.29□□□□□ -0.28
CIITA-212ENST00000618207 MAATS1Q7Z4T9 603 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 AFAP1L1Q8TED9 768 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 C18orf8Q96DM3 657 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 C11orf70Q9BRQ4 267 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 TAF1DQ9H5J8 278 aaPredicted RBP13.29□□□□□ -0.28
CIITA-212ENST00000618207 PTPN22Q9Y2R2 807 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 NUB1Q9Y5A7 615 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 CEP350Q5VT06 3117 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 A0A0B4J269 797 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 GOLGA6CA6NDK9 693 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 GOLGA6DP0CG33 693 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 SSR1P43307 286 aaKnown RBP13.29□□□□□ -0.28
CIITA-212ENST00000618207 AARSP49588 968 aaKnown RBP eCLIP13.29□□□□□ -0.28
CIITA-212ENST00000618207 TFAMQ00059 246 aaKnown RBP13.29□□□□□ -0.28
CIITA-212ENST00000618207 RASGEF1CQ8N431 466 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 GOLGA6AQ9NYA3 693 aa13.29□□□□□ -0.28
CIITA-212ENST00000618207 CXCL11O14625 94 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 GRIN3BO60391 1043 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 GZMAP12544 262 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 KCNJ1P48048 391 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 NOP14P78316 857 aaKnown RBP13.28□□□□□ -0.28
CIITA-212ENST00000618207 CELF3Q5SZQ8 465 aaKnown RBP13.28□□□□□ -0.28
CIITA-212ENST00000618207 UBL4BQ8N7F7 174 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 EXOC4Q96A65 974 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 RNPEPQ9H4A4 650 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 CES2O00748 559 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 MAFO75444 373 aaPredicted RBP13.28□□□□□ -0.28
CIITA-212ENST00000618207 PRKCBP05771 671 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 TGFB3P10600 412 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 OSBPP22059 807 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 SCP2P22307 547 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 NCOA4Q13772 614 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 SLFN12LQ6IEE8 588 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 ACAD10Q6JQN1 1059 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 CCDC26Q8TAB7 109 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 UBLCP1Q8WVY7 318 aaPredicted RBP13.28□□□□□ -0.28
CIITA-212ENST00000618207 VTI1AQ96AJ9 217 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 SLC10A4Q96EP9 437 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 ZSWIM1Q9BR11 485 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 CARD9Q9H257 536 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 KIAA1586Q9HCI6 787 aa13.28□□□□□ -0.28
CIITA-212ENST00000618207 CCDC188H7C350 402 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 PMM2O15305 246 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 THAP12O43422 761 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 SLC25A27O95847 323 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 GNA15P30679 374 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 MAPK4P31152 587 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 GTF2H1P32780 548 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 RFC5P40937 340 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 ATP1A2P50993 1020 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 GCNT1Q02742 428 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 CUL2Q13617 745 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 PLCB4Q15147 1175 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 EFCAB12Q6NXP0 572 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 C15orf39Q6ZRI6 1047 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 ZDHHC14Q8IZN3 488 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 CALR3Q96L12 384 aaKnown RBP13.27□□□□□ -0.28
CIITA-212ENST00000618207 GINS2Q9Y248 185 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 USTQ9Y2C2 406 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 SNX24Q9Y343 169 aa13.27□□□□□ -0.28
CIITA-212ENST00000618207 MSCO60682 206 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 KRT19P08727 400 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 WEE2P0C1S8 567 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 NSFP46459 744 aaKnown RBP13.27□□□□□ -0.29
CIITA-212ENST00000618207 MAPK6Q16659 721 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 CLEC16AQ2KHT3 1053 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 GPAT2Q6NUI2 795 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 TMEM192Q8IY95 271 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 CAVIN3Q969G5 261 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms