RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 TBX3O15119 743 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 AP1G2O75843 785 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 HOXA7P31268 230 aaPredicted RBP11.6□□□□□ -0.55
POLR2A-209ENST00000617998 PASD1Q8IV76 773 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 CFAP99D6REC4 459 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 NPEPPSP55786 919 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 PSMC1P62191 440 aaKnown RBP11.6□□□□□ -0.55
POLR2A-209ENST00000617998 MESDQ14696 234 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 RAD54LQ92698 747 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 COPS5Q92905 334 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 LSG1Q9H089 658 aaKnown RBP11.6□□□□□ -0.55
POLR2A-209ENST00000617998 SMYD2Q9NRG4 433 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 ANAPC4Q9UJX5 808 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 COL14A1Q05707 1796 aaKnown RBP11.6□□□□□ -0.55
POLR2A-209ENST00000617998 H3BRJ5 948 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 GLUD2P49448 558 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 ZNF280AP59817 542 aaPredicted RBP11.6□□□□□ -0.55
POLR2A-209ENST00000617998 PGM5Q15124 567 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 AMHR2Q16671 573 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 TTC8Q8TAM2 541 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 ATOH1Q92858 354 aaPredicted RBP11.6□□□□□ -0.55
POLR2A-209ENST00000617998 BADQ92934 168 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 VPS37BQ9H9H4 285 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 LY9Q9HBG7 655 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 FAM49BQ9NUQ9 324 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 YDJCA8MPS7 323 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 SGK1O00141 431 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 APODP05090 189 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 PLS3P13797 630 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 CELF3Q5SZQ8 465 aaKnown RBP11.6□□□□□ -0.55
POLR2A-209ENST00000617998 ZFPM1Q8IX07 1006 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 GRK7Q8WTQ7 553 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.6□□□□□ -0.55
POLR2A-209ENST00000617998 WDR19Q8NEZ3 1342 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 TLDC2A0PJX2 215 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SGPL1O95470 568 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 GRSF1Q12849 480 aaKnown RBP eCLIP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 PSMD5Q16401 504 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SGSM1Q2NKQ1 1148 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 CRY2Q49AN0 593 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 FAM102AQ5T9C2 384 aaPredicted RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 KDELC2Q7Z4H8 507 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 ZNF557Q8N988 423 aaPredicted RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 DHTKD1Q96HY7 919 aaPredicted RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 PLCB1Q9NQ66 1216 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 VWDEQ8N2E2 1590 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 M0QYT0 321 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 LAMTOR5O43504 91 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 COBLO75128 1261 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 ZWINTO95229 277 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 POLR2EP19388 210 aaKnown RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 RPS6KA1Q15418 735 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 PHACTR4Q8IZ21 702 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 CHPFQ8IZ52 775 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 CNOT6LQ96LI5 555 aaKnown RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 GTPBP2Q9BX10 602 aaKnown RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 KCNK9Q9NPC2 374 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SCINQ9Y6U3 715 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SLC12A8A0AV02 714 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 H2AFZP0C0S5 128 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 MAP4P27816 1152 aaKnown RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 TPI1P60174 286 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 H2AFVQ71UI9 128 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 P2RX5Q93086 422 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 UTP11Q9Y3A2 253 aaKnown RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 LRRD1A4D1F6 860 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SCP2P22307 547 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 NLRP12P59046 1061 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 ERCC6LQ2NKX8 1250 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SAMD11Q96NU1 681 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 TARS2Q9BW92 718 aaKnown RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SNTG2Q9NY99 539 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 TMEM131LA2VDJ0 1609 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 CSDE1O75534 798 aaKnown RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 ZBED1O96006 694 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 CALB1P05937 261 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 AKAP5P24588 427 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SHMT1P34896 483 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 RFC2P35250 354 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 KRT39Q6A163 491 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 PROM2Q8N271 834 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 DEFB123Q8N688 67 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 DDX4Q9NQI0 724 aaKnown RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 HSF2BPO75031 334 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SPATA31D3P0C874 917 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 GNA15P30679 374 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 EFEMP1Q12805 493 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 TMED2Q15363 201 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SLC27A1Q6PCB7 646 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 SPATA31D4Q6ZUB0 917 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 ADGRF2Q8IZF7 708 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 POLMQ9NP87 494 aaPredicted RBP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 LZTFL1Q9NQ48 299 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.59□□□□□ -0.55
POLR2A-209ENST00000617998 VPS28Q9UK41 221 aa11.59□□□□□ -0.55
POLR2A-209ENST00000617998 ACADSBP45954 432 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 OXCT1P55809 520 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 FMR1Q06787 632 aaKnown RBP eCLIP11.58□□□□□ -0.562e-7■■■■□ 22.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms