RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 MYH11P35749 1972 aa27.57■■■□□ 2
VEGFA-228ENST00000617771 PLXNA3P51805 1871 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 TMEM221A6NGB7 291 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 K7ENM7 598 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 M0R296 226 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 SPATA31D3P0C874 917 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 MYBP10242 640 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 CEBPZQ03701 1054 aaKnown RBP27.56■■■□□ 2
VEGFA-228ENST00000617771 SIGLEC14Q08ET2 396 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 SPECC1Q5M775 1068 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 LILRA6Q6PI73 481 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 SPATA31D4Q6ZUB0 917 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 HFE2Q6ZVN8 426 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 LNX1Q8TBB1 728 aaPredicted RBP27.56■■■□□ 2
VEGFA-228ENST00000617771 FEZF2Q8TBJ5 459 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 SNX21Q969T3 373 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 ZHX3Q9H4I2 956 aa27.56■■■□□ 2
VEGFA-228ENST00000617771 TRAK2O60296 914 aa27.55■■■□□ 2
VEGFA-228ENST00000617771 ABCD1P33897 745 aa27.55■■■□□ 2
VEGFA-228ENST00000617771 OTOP3Q7RTS5 596 aa27.55■■■□□ 2
VEGFA-228ENST00000617771 KREMEN2Q8NCW0 462 aa27.55■■■□□ 2
VEGFA-228ENST00000617771 ZMAT2Q96NC0 199 aaKnown RBP27.55■■■□□ 2
VEGFA-228ENST00000617771 CLSTN3Q9BQT9 956 aa27.55■■■□□ 2
VEGFA-228ENST00000617771 ZDHHC7Q9NXF8 308 aa27.55■■■□□ 2
VEGFA-228ENST00000617771 STK17AQ9UEE5 414 aa27.55■■■□□ 2
VEGFA-228ENST00000617771 TBX20Q9UMR3 447 aa27.55■■■□□ 2
VEGFA-228ENST00000617771 SORCS3Q9UPU3 1222 aa27.55■■■□□ 2
VEGFA-228ENST00000617771 MORC2Q9Y6X9 1032 aaPredicted RBP27.55■■■□□ 2
VEGFA-228ENST00000617771 RFPL2O75678 378 aa27.54■■■□□ 2
VEGFA-228ENST00000617771 FGFR3P22607 806 aa27.54■■■□□ 2
VEGFA-228ENST00000617771 LIG4P49917 911 aa27.54■■■□□ 2
VEGFA-228ENST00000617771 SOX4Q06945 474 aaPredicted RBP27.54■■■□□ 2
VEGFA-228ENST00000617771 USP49Q70CQ1 688 aa27.54■■■□□ 2
VEGFA-228ENST00000617771 BMP8AQ7Z5Y6 402 aa27.54■■■□□ 2
VEGFA-228ENST00000617771 KRI1Q8N9T8 703 aaKnown RBP27.54■■■□□ 2
VEGFA-228ENST00000617771 SMG7Q92540 1137 aaKnown RBP27.54■■■□□ 2
VEGFA-228ENST00000617771 PODXLO00592 558 aa27.53■■■□□ 2
VEGFA-228ENST00000617771 HNRNPDLO14979 420 aaKnown RBP27.53■■■□□ 2
VEGFA-228ENST00000617771 PAPLNO95428 1278 aa27.53■■■□□ 2
VEGFA-228ENST00000617771 RPL9P32969 192 aaKnown RBP27.53■■■□□ 2
VEGFA-228ENST00000617771 MTMR3Q13615 1198 aa27.53■■■□□ 2
VEGFA-228ENST00000617771 KYAT1Q16773 422 aa27.53■■■□□ 2
VEGFA-228ENST00000617771 UBALD2Q8IYN6 164 aa27.53■■■□□ 2
VEGFA-228ENST00000617771 STAMQ92783 540 aa27.53■■■□□ 2
VEGFA-228ENST00000617771 CLIC6Q96NY7 704 aa27.53■■■□□ 2
VEGFA-228ENST00000617771 USP28Q96RU2 1077 aa27.53■■■□□ 2
VEGFA-228ENST00000617771 PIDD1Q9HB75 910 aa27.53■■■□□ 2
VEGFA-228ENST00000617771 WDR6Q9NNW5 1121 aaKnown RBP27.53■■■□□ 2
VEGFA-228ENST00000617771 DENND4AQ7Z401 1863 aa27.53■■■□□ 2
VEGFA-228ENST00000617771 CLTAP09496 248 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 SLC39A14Q15043 492 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 SLC10A6Q3KNW5 377 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 SEZ6Q53EL9 994 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 RRAGBQ5VZM2 374 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 CD300LGQ6UXG3 332 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 HSCBQ8IWL3 235 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 C3orf58Q8NDZ4 430 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 PBXIP1Q96AQ6 731 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 LIMD1Q9UGP4 676 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 FBXW11Q9UKB1 542 aa27.52■■■□□ 2
VEGFA-228ENST00000617771 CLUHO75153 1309 aa27.51■■□□□ 1.99
VEGFA-228ENST00000617771 PIGRP01833 764 aa27.51■■□□□ 1.99
VEGFA-228ENST00000617771 IGFBP6P24592 240 aaPredicted RBP27.51■■□□□ 1.99
VEGFA-228ENST00000617771 LIN9Q5TKA1 542 aa27.51■■□□□ 1.99
VEGFA-228ENST00000617771 ANKS3Q6ZW76 656 aa27.51■■□□□ 1.99
VEGFA-228ENST00000617771 ZNF707Q96C28 371 aaPredicted RBP27.51■■□□□ 1.99
VEGFA-228ENST00000617771 FAM122AQ96E09 287 aa27.51■■□□□ 1.99
VEGFA-228ENST00000617771 PRKD2Q9BZL6 878 aa27.51■■□□□ 1.99
VEGFA-228ENST00000617771 PLEKHA5Q9HAU0 1116 aa27.51■■□□□ 1.99
VEGFA-228ENST00000617771 MTRRQ9UBK8 725 aa27.51■■□□□ 1.99
VEGFA-228ENST00000617771 ZMYND10O75800 440 aa27.5■■□□□ 1.99
VEGFA-228ENST00000617771 TKTP29401 623 aaKnown RBP27.5■■□□□ 1.99
VEGFA-228ENST00000617771 BRCC3P46736 316 aa27.5■■□□□ 1.99
VEGFA-228ENST00000617771 C18orf25Q96B23 403 aaPredicted RBP27.5■■□□□ 1.99
VEGFA-228ENST00000617771 HAPLN2Q9GZV7 340 aa27.5■■□□□ 1.99
VEGFA-228ENST00000617771 NUB1Q9Y5A7 615 aa27.5■■□□□ 1.99
VEGFA-228ENST00000617771 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.5■■□□□ 1.99
VEGFA-228ENST00000617771 I3L4J1 428 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 MEFVO15553 781 aaPredicted RBP27.49■■□□□ 1.99
VEGFA-228ENST00000617771 ASGR2P07307 311 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 CXCL8P10145 99 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 PLA2G5P39877 138 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 GTF2BQ00403 316 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 RAB33AQ14088 237 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 CCDC73Q6ZRK6 1079 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 SV2BQ7L1I2 683 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 SUGP1Q8IWZ8 645 aaKnown RBP27.49■■□□□ 1.99
VEGFA-228ENST00000617771 BACE2Q9Y5Z0 518 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 TRIP11Q15643 1979 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 C2orf16Q68DN1 1984 aa27.49■■□□□ 1.99
VEGFA-228ENST00000617771 OGTO15294 1046 aa27.48■■□□□ 1.99
VEGFA-228ENST00000617771 ADAM12O43184 909 aa27.48■■□□□ 1.99
VEGFA-228ENST00000617771 HSP90AA1P07900 732 aaKnown RBP27.48■■□□□ 1.99
VEGFA-228ENST00000617771 PDIA4P13667 645 aaKnown RBP27.48■■□□□ 1.99
VEGFA-228ENST00000617771 NMT1P30419 496 aaKnown RBP27.48■■□□□ 1.99
VEGFA-228ENST00000617771 OR1D2P34982 312 aa27.48■■□□□ 1.99
VEGFA-228ENST00000617771 NASPP49321 788 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-228ENST00000617771 PPP2R3AQ06190 1150 aa27.48■■□□□ 1.99
VEGFA-228ENST00000617771 STK38Q15208 465 aa27.48■■□□□ 1.99
VEGFA-228ENST00000617771 DYMQ7RTS9 669 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms