RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RBM12Q9NTZ6 932 aaKnown RBP18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 H3BRB1 525 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 PPFIA4O75335 1185 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 ZMYND10O75800 440 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 SASH3O75995 380 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 PROZP22891 400 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 ZNF568Q3ZCX4 644 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 RASAL3Q86YV0 1011 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 LINC01465Q8N7H1 131 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 OR6J1Q8NGC5 347 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 HNRNPLLQ8WVV9 542 aaKnown RBP18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 FAM81BQ96LP2 452 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 TUT1Q9H6E5 874 aaKnown RBP18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 IFT122Q9HBG6 1241 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 PTPRHQ9HD43 1115 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 FAM53CQ9NYF3 392 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 CHORDC1Q9UHD1 332 aaPredicted RBP18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 CPSF3Q9UKF6 684 aaKnown RBP18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 UMODL1Q5DID0 1318 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 TARSL2A2RTX5 802 aaKnown RBP18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 CLSTN1O94985 981 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 GZMAP12544 262 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 ZNF157P51786 506 aaPredicted RBP18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 MRPS25P82663 173 aaKnown RBP18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 NCOA4Q13772 614 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 BEND6Q5SZJ8 279 aaPredicted RBP18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 THNSL1Q8IYQ7 743 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 LRRC1Q9BTT6 524 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 AKT3Q9Y243 479 aa18.63■□□□□ 0.57
PCDHGC3-205ENST00000617641 ATMINO43313 823 aaPredicted RBP18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 ERLIN1O75477 346 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 VTNP04004 478 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 TUBBP07437 444 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 MMP3P08254 477 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 OSTNP61366 133 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 NOP14P78316 857 aaKnown RBP18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 GPC5P78333 572 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 CUL2Q13617 745 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 WDR49Q8IV35 697 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 CEP120Q8N960 986 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 MTMR12Q9C0I1 747 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 CTTNBP2NLQ9P2B4 639 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 AMFRQ9UKV5 643 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 NUB1Q9Y5A7 615 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 A0A087WZ62 844 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 MAGEB2O15479 319 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 PRAMEF19Q5SWL8 479 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 RHOT2Q8IXI1 618 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 HDAC7Q8WUI4 952 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 HINFPQ9BQA5 517 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 FDXACB1Q9BRP7 624 aaPredicted RBP18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 FUT8Q9BYC5 575 aa18.62■□□□□ 0.57
PCDHGC3-205ENST00000617641 CES2O00748 559 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 CLTAP09496 248 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 ACO1P21399 889 aaKnown RBP18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 PHKA2P46019 1235 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 GRM1Q13255 1194 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 MTHFD1LQ6UB35 978 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 HES6Q96HZ4 224 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 PBKQ96KB5 322 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 NFKBIZQ9BYH8 718 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 CDT1Q9H211 546 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 ZNF236Q9UL36 1845 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 COL1A2P08123 1366 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 ZSWIM8A7E2V4 1837 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 DOCK3Q8IZD9 2030 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 CEP104O60308 925 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 CST3P01034 146 aaPredicted RBP18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 MORN1Q5T089 497 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 IQSEC1Q6DN90 963 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 CCDC70Q6NSX1 233 aa18.61■□□□□ 0.57
PCDHGC3-205ENST00000617641 TRPM7Q96QT4 1865 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 HOXD8P13378 290 aaPredicted RBP18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 PPFIA1Q13136 1202 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 TAF1CQ15572 869 aaPredicted RBP18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 GRIK4Q16099 956 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 TMEM192Q8IY95 271 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 PRMT7Q9NVM4 692 aaPredicted RBP18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 SLC5A4Q9NY91 659 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 TNFSF13BQ9Y275 285 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 PCDHB4Q9Y5E5 795 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 ATP8B1O43520 1251 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 HOXC6P09630 235 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 AP3M2P53677 418 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 HADHBP55084 474 aaKnown RBP18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 SLC7A5Q01650 507 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 TNFAIP2Q03169 654 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 DGKDQ16760 1214 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 CLEC16AQ2KHT3 1053 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 KRT222Q8N1A0 295 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 USP38Q8NB14 1042 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 FLRT1Q9NZU1 646 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 DMGDHQ9UI17 866 aaKnown RBP18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 PCDHB2Q9Y5E7 798 aa18.6■□□□□ 0.57
PCDHGC3-205ENST00000617641 TMOD1P28289 359 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 TFAMQ00059 246 aaKnown RBP18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 POU5F1BQ06416 359 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 MAP2K5Q13163 448 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 TCEAL1Q15170 157 aa18.59■□□□□ 0.57
PCDHGC3-205ENST00000617641 AMHR2Q16671 573 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms