RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 FSD1Q9BTV5 496 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 NT5C1AQ9BXI3 368 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 CHMP4BQ9H444 224 aaKnown RBP5.47□□□□□ -1.53
CUL3-216ENST00000617432 RPAP3Q9H6T3 665 aaPredicted RBP5.47□□□□□ -1.53
CUL3-216ENST00000617432 AS3MTQ9HBK9 375 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 BARX1Q9HBU1 254 aaPredicted RBP5.47□□□□□ -1.53
CUL3-216ENST00000617432 BTBD7Q9P203 1132 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 RBPJLQ9UBG7 517 aa5.47□□□□□ -1.53
CUL3-216ENST00000617432 RLFQ13129 1914 aa5.46□□□□□ -1.53
CUL3-216ENST00000617432 MKI67P46013 3256 aaKnown RBP5.46□□□□□ -1.54
CUL3-216ENST00000617432 MYH8P13535 1937 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 A0A0D9SFI3 127 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 AURKAO14965 403 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 SGSM2O43147 1006 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 FOXS1O43638 330 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 FUCA1P04066 466 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 CCL5P13501 91 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 ITGA4P13612 1032 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 PDE1AP54750 535 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 HERVK_113P62684 666 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 NKX3-2P78367 333 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 IRX3P78415 501 aaPredicted RBP5.46□□□□□ -1.54
CUL3-216ENST00000617432 NFATC3Q12968 1075 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 HDAC1Q13547 482 aaPredicted RBP5.46□□□□□ -1.54
CUL3-216ENST00000617432 KIF22Q14807 665 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 CCL14Q16627 93 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 FAM110CQ1W6H9 321 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 C16orf86Q6ZW13 317 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 ZNF589Q86UQ0 364 aaPredicted RBP5.46□□□□□ -1.54
CUL3-216ENST00000617432 LDLRAD3Q86YD5 345 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 RAET1EQ8TD07 263 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 EXTL1Q92935 676 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 C12orf42Q96LP6 360 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 FAM227BQ96M60 508 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 NUP88Q99567 741 aaPredicted RBP5.46□□□□□ -1.54
CUL3-216ENST00000617432 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.46□□□□□ -1.54
CUL3-216ENST00000617432 IL25Q9H293 177 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 FBXO28Q9NVF7 368 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 TMOD4Q9NZQ9 345 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 FTSJ1Q9UET6 329 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 SLC45A1Q9Y2W3 748 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 PARP14Q460N5 1801 aa5.46□□□□□ -1.54
CUL3-216ENST00000617432 ROBO3Q96MS0 1386 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 TTC41PQ6P2S7 1318 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 TRBV23OR9-2A0A075B6M9 112 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 ADCY3O60266 1144 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 NPHS1O60500 1241 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 IMPDH2P12268 514 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 EEF2P13639 858 aaKnown RBP5.45□□□□□ -1.54
CUL3-216ENST00000617432 CYP2B6P20813 491 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 HOXA7P31268 230 aaPredicted RBP5.45□□□□□ -1.54
CUL3-216ENST00000617432 MLLT6P55198 1093 aaPredicted RBP5.45□□□□□ -1.54
CUL3-216ENST00000617432 ICA1Q05084 483 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 PPP2R5DQ14738 602 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 FAM47AQ5JRC9 791 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 TCTN3Q6NUS6 607 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 CATSPERGQ6ZRH7 1159 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 PPFIBP1Q86W92 1011 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 CPNE8Q86YQ8 564 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 SMC5Q8IY18 1101 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 PLEKHO2Q8TD55 490 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 DIS3LQ8TF46 1054 aaKnown RBP5.45□□□□□ -1.54
CUL3-216ENST00000617432 SEC14L1Q92503 715 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 TRIB2Q92519 343 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 GPATCH3Q96I76 525 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 CLIC6Q96NY7 704 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 FERD3LQ96RJ6 166 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 KIAA1683Q9H0B3 1180 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 ATP8A2Q9NTI2 1148 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 FLRT1Q9NZU1 646 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 MORF4L1Q9UBU8 362 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 GJD2Q9UKL4 321 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 ZDHHC9Q9Y397 364 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 ZNF451Q9Y4E5 1061 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 DOCK3Q8IZD9 2030 aa5.45□□□□□ -1.54
CUL3-216ENST00000617432 C19orf81C9J6K1 198 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 NMT2O60551 498 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 IGSF3O75054 1194 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 GLRX3O76003 335 aaKnown RBP5.44□□□□□ -1.54
CUL3-216ENST00000617432 STAT5AP42229 794 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 TDO2P48775 406 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 SEPHS1P49903 392 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 DGCR2P98153 550 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 TCEAL1Q15170 157 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 CR1LQ2VPA4 569 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 FBXW10Q5XX13 1052 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 TMEM179Q6ZVK1 233 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 GPR142Q7Z601 462 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 CERS3Q8IU89 383 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 IFNL3Q8IZI9 196 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 LRRC47Q8N1G4 583 aaKnown RBP5.44□□□□□ -1.54
CUL3-216ENST00000617432 NPLOC4Q8TAT6 608 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 RNF34Q969K3 372 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 MCMBPQ9BTE3 642 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 SPON2Q9BUD6 331 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 TANGO6Q9C0B7 1094 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 CABP5Q9NP86 173 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 ARPP21Q9UBL0 812 aaPredicted RBP5.44□□□□□ -1.54
CUL3-216ENST00000617432 STAP2Q9UGK3 403 aa5.44□□□□□ -1.54
CUL3-216ENST00000617432 COL11A1P12107 1806 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms