RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 TMC2Q8TDI7 906 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 PARD3BQ8TEW8 1205 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 RSPH1Q8WYR4 309 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 C18orf25Q96B23 403 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 FAM84AQ96KN4 292 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 FAM193BQ96PV7 902 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 PPP1R10Q96QC0 940 aaKnown RBP16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 TSPAN18Q96SJ8 248 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 CBX8Q9HC52 389 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 METTL14Q9HCE5 456 aaKnown RBP16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 ARMCX3Q9UH62 379 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 PCDHA11Q9Y5I1 949 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 LCHNA4D1U4 455 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 SMTNL1A8MU46 457 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 CAVIN2O95810 425 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 PBX2P40425 430 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 GUCY2FP51841 1108 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 DLG4P78352 724 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 TFAMQ00059 246 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 NCAPHQ15003 741 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 IQCB1Q15051 598 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 HSP90AA4PQ58FG1 418 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 SPOUT1Q5T280 376 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 DHX40Q8IX18 779 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 TMEM130Q8N3G9 435 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 FIBCD1Q8N539 461 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 SP7Q8TDD2 431 aaPredicted RBP16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 CNOT6LQ96LI5 555 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 CWH43Q9H720 699 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 NRDE2Q9H7Z3 1164 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 SLC38A7Q9NVC3 462 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 FANCLQ9NW38 375 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 UBQLN1Q9UMX0 589 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 YBX2Q9Y2T7 364 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 DERAQ9Y315 318 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 C2CD2Q9Y426 696 aa16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 MRPL42Q9Y6G3 142 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-204ENST00000617222 TNRC18O15417 2968 aaPredicted RBP16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 LRRIQ3A6PVS8 624 aaPredicted RBP16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 BECN2A8MW95 431 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 IKBKBO14920 756 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 B4GALT3O60512 393 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 TRIM49P0CI25 452 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 TRIM49CP0CI26 452 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 SOX4Q06945 474 aaPredicted RBP16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 BFSP1Q12934 665 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 NAB2Q15742 525 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 USP37Q86T82 979 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 NT5DC4Q86YG4 428 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 WDR49Q8IV35 697 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 BEST2Q8NFU1 509 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 OR5B17Q8NGF7 314 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 CACTINQ8WUQ7 758 aaKnown RBP16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 ZNF516Q92618 1163 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 CGRRF1Q99675 332 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 ANP32EQ9BTT0 268 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 PBX4Q9BYU1 374 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 INTS13Q9NVM9 706 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 MAGEC2Q9UBF1 373 aaPredicted RBP16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 TUBGCP4Q9UGJ1 667 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 MSRAQ9UJ68 235 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 PTPRJQ12913 1337 aa16.91■□□□□ 0.3
PCDHGC3-204ENST00000617222 A0A1W2PPC1 479 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 CASTOR2A6NHX0 329 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 XPOTO43592 962 aaKnown RBP16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 ZC3H11AO75152 810 aaKnown RBP eCLIP16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 CA3P07451 260 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 TMEM191BP0C7N4 346 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 CYP3A5P20815 502 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 DSC1Q08554 894 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 TUSC3Q13454 348 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 RAB30Q15771 203 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 DUOXA2Q1HG44 320 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 DCAF17Q5H9S7 520 aaPredicted RBP16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 C1orf220Q5T0J3 134 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 TCERG1LQ5VWI1 586 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 LUZP1Q86V48 1076 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 COLGALT2Q8IYK4 626 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 FAM200AQ8TCP9 573 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 RABGGTAQ92696 567 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 ANKRD36BP1Q96IX9 119 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 MTMR12Q9C0I1 747 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 NKX2-4Q9H2Z4 354 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 MMRN2Q9H8L6 949 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 GOLGA2P5Q9HBQ8 144 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 DPP3Q9NY33 737 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 CACNG4Q9UBN1 327 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 DNAJB4Q9UDY4 337 aa16.9■□□□□ 0.3
PCDHGC3-204ENST00000617222 LINC01553A4QN01 128 aa16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 KCNJ18B7U540 433 aa16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 ARHGEF15O94989 841 aa16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 TNNC2P02585 160 aa16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 ALDH2P05091 517 aa16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 CDK11BP21127 795 aaKnown RBP16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 MTIF2P46199 727 aaKnown RBP16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 OR1G1P47890 313 aa16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 MARSP56192 900 aaKnown RBP16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 MCCD1P59942 119 aaPredicted RBP16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 CLDN10P78369 228 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms