RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CDKL3Q8IVW4 592 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 GDAP1Q8TB36 358 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 UPF1Q92900 1129 aaKnown RBP eCLIP10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 EXOC4Q96A65 974 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 RNF25Q96BH1 459 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 CYP39A1Q9NYL5 469 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 PPP1R3GB7ZBB8 358 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 H7C4K7 107 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 ITGB3P05106 788 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 GSTA1P08263 222 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 GSTA2P09210 222 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 PAMP19021 973 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 RAB27AP51159 221 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 LAMTOR4Q0VGL1 99 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 ANKRD20A3Q5VUR7 823 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 ITPRIPL1Q6GPH6 555 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 OTOP1Q7RTM1 612 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 DHX38Q92620 1227 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 TRIM56Q9BRZ2 755 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 HEMGNQ9BXL5 484 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 SP110Q9HB58 689 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 HPSEQ9Y251 543 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 ADGRG1Q9Y653 693 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 PIK3CDO00329 1044 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 ASPHQ12797 758 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 MAP2K5Q13163 448 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 CUL1Q13616 776 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 MYBPC2Q14324 1141 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 SLC18A3Q16572 532 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 GLE1Q53GS7 698 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 CDR2LQ86X02 465 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 SEPT5Q99719 369 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 SIK2Q9H0K1 926 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 A0A087WZ62 844 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 ADCY3O60266 1144 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 EVI5O60447 810 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 FKTNO75072 461 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 CYP2C19P33261 490 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 SULT1E1P49888 294 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 HSD17B4P51659 736 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 ATP11AP98196 1134 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 RPS6KA2Q15349 733 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 MGAT5BQ3V5L5 792 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 VSIG10LQ86VR7 867 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 SENP7Q9BQF6 1050 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 FDXACB1Q9BRP7 624 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 FSD1LQ9BXM9 530 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 PLEKHA5Q9HAU0 1116 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 TLK1Q9UKI8 766 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 ATP8A1Q9Y2Q0 1164 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 FHOD1Q9Y613 1164 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 PMLP29590 882 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 RARRES1P49788 294 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 MOB2Q70IA6 237 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 ZNF720Q7Z2F6 126 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 VSIG1Q86XK7 387 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 C10orf67Q8IYJ2 551 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 WHAMMQ8TF30 809 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 IFT43Q96FT9 208 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 ZNF512Q96ME7 567 aaPredicted RBP10□□□□□ -0.81
CLTCL1-208ENST00000615606 NUDCD1Q96RS6 583 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 RNF208Q9H0X6 261 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 OLFML3Q9NRN5 406 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 KLK14Q9P0G3 267 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 AHDC1Q5TGY3 1603 aaPredicted RBP10□□□□□ -0.81
CLTCL1-208ENST00000615606 OAS2P29728 719 aaKnown RBP10□□□□□ -0.81
CLTCL1-208ENST00000615606 ADCYAP1R1P41586 468 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 ALDH1A3P47895 512 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 RGS7P49802 495 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 CDH6P55285 790 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 NR1I3Q14994 352 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 HEATR6Q6AI08 1181 aaKnown RBP10□□□□□ -0.81
CLTCL1-208ENST00000615606 TRAPPC11Q7Z392 1133 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 CYP2W1Q8TAV3 490 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 TMC2Q8TDI7 906 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 RILPQ96NA2 401 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 FMO2Q99518 471 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 APBA2Q99767 749 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 SPON2Q9BUD6 331 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 MED4Q9NPJ6 270 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 A0A1W2PQJ5 194 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 PDGFRAP16234 1089 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 SLC9A1P19634 815 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 ARL4CP56559 192 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 DHX9Q08211 1270 aaKnown RBP10□□□□□ -0.81
CLTCL1-208ENST00000615606 ZNF410Q86VK4 478 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 PYROXD1Q8WU10 500 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 SPIRE2Q8WWL2 714 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 OSMRQ99650 979 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 CGRRF1Q99675 332 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 TRPC7Q9HCX4 862 aa10□□□□□ -0.81
CLTCL1-208ENST00000615606 FNDC3AQ9Y2H6 1198 aaKnown RBP10□□□□□ -0.81
CLTCL1-208ENST00000615606 B3GAT3O94766 335 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 FAM200BP0CF97 657 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 ZNF280AP59817 542 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 MAP7Q14244 749 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 TTC31Q49AM3 519 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 GPR142Q7Z601 462 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 ANKRD23Q86SG2 305 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms