RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 METTL23Q86XA0 190 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 MMGT1Q8N4V1 131 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 NSMCE1Q8WV22 266 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 ACAP3Q96P50 834 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 FUT8Q9BYC5 575 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 CNOT10Q9H9A5 744 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 ALG13Q9NP73 1137 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 SIK3Q9Y2K2 1263 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 ASTN1O14525 1302 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 A8MXQ7 604 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 RASA4BC9J798 803 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 RASA4O43374 803 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 PEX10O60683 326 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 TOM1L1O75674 476 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 CTSHP09668 335 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 KCNMA1Q12791 1236 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 SH3BP5LQ7L8J4 393 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 VPS52Q8N1B4 723 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 PRPF31Q8WWY3 499 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 EFCC1Q9HA90 598 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 FAM49BQ9NUQ9 324 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 ZNF446Q9NWS9 450 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 PFASO15067 1338 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 DDNO94850 711 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 MT-ND3P03897 115 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 SUPT20HL2P0C7V6 817 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 PPM1FP49593 454 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 EIF3BP55884 814 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 PAPD7Q5XG87 772 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 WDR59Q6PJI9 974 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 RSPH3Q86UC2 560 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 JAMLQ86YT9 394 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 SEPT1Q8WYJ6 367 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 HSD3B7Q9H2F3 369 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 ROBO3Q96MS0 1386 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 AP1B1Q10567 949 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 MEI1Q5TIA1 1274 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 ANKRD20A3Q5VUR7 823 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 GPAT2Q6NUI2 795 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 ZNF449Q6P9G9 518 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 EPM2AIP1Q7L775 607 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 DNAAF3Q8N9W5 541 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 SENP7Q9BQF6 1050 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 NPTXRO95502 500 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 CLCN3P51790 818 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 NLRP11P59045 1033 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 ROR1Q01973 937 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 SEPT6Q14141 434 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 NUGGCQ68CJ6 796 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 FASTKD5Q7L8L6 764 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 BEST2Q8NFU1 509 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 TAS1R2Q8TE23 839 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 ACP6Q9NPH0 428 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 TAS2R14Q9NYV8 317 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 DYNC1LI2O43237 492 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 XPOTO43592 962 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 ITGB3P05106 788 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 UGCGQ16739 394 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 SPIRE2Q8WWL2 714 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 FAM84AQ96KN4 292 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 ASB14A6NK59 587 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 RGL2O15211 777 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 FDX1P10109 184 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 PDE1BQ01064 536 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 CNTN2Q02246 1040 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 TRAPPC12Q8WVT3 735 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 MAML1Q92585 1016 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 DNAJC19Q96DA6 116 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 ANKEF1Q9NU02 776 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 KLK14Q9P0G3 267 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 FAM187AA6NFU0 413 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 GOLGA8RI6L899 631 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 SUN1O94901 812 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 CYP24A1Q07973 514 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 SNAPC2Q13487 334 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 DHX34Q14147 1143 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 E2F5Q15329 346 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 MAP7D1Q3KQU3 841 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 GLRA4Q5JXX5 417 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 ENOSF1Q7L5Y1 443 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 TTC17Q96AE7 1141 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 RSRC1Q96IZ7 334 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 PDCD2LQ9BRP1 358 aa9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 FNDC3AQ9Y2H6 1198 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-222ENST00000615540 ARHGAP42A6NI28 874 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 GLI1P08151 1106 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 CYP11B1P15538 503 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 CHN1P15882 459 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 SLC12A2P55011 1212 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 CDH6P55285 790 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 CUL2Q13617 745 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 PRPSAP1Q14558 356 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 TMEM132DQ14C87 1099 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 SNCBQ16143 134 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 GOLGA7BQ2TAP0 167 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 DCLK2Q8N568 766 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 CHST13Q8NET6 341 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 CCHCR1Q8TD31 782 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 PPP4R1Q8TF05 950 aa9.46□□□□□ -0.89
PDLIM5-222ENST00000615540 DHX35Q9H5Z1 703 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms