RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 CBWD2Q8IUF1 395 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 EXOC8Q8IYI6 725 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 RNF168Q8IYW5 571 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-208ENST00000614678 FSIP1Q8NA03 581 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 PLEKHO2Q8TD55 490 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 SCFD1Q8WVM8 642 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 PGBD4Q96DM1 585 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 FAM193BQ96PV7 902 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-208ENST00000614678 LPIN3Q9BQK8 851 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 FAM213AQ9BRX8 229 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 PLVAPQ9BX97 442 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 C2orf40Q9H1Z8 148 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 EPHX3Q9H6B9 360 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 TECTAO75443 2155 aa6.23□□□□□ -1.41
CPNE3-208ENST00000614678 A0A0B4J269 797 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 FRMD3A2A2Y4 597 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 N4BP3O15049 544 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 N4BP1O75113 896 aaKnown RBP6.22□□□□□ -1.41
CPNE3-208ENST00000614678 NR1I2O75469 434 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 SOAT2O75908 522 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 AXLP30530 894 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 NTHL1P78549 312 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 MCL1Q07820 350 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 DPYDQ12882 1025 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 SNW1Q13573 536 aaKnown RBP6.22□□□□□ -1.41
CPNE3-208ENST00000614678 TIGD5Q53EQ6 642 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 KIAA0319Q5VV43 1072 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 ADALQ6DHV7 355 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 MAP4K3Q8IVH8 894 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 TTC9BQ8N6N2 239 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 RIN2Q8WYP3 895 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-208ENST00000614678 PABPC5Q96DU9 382 aaKnown RBP6.22□□□□□ -1.41
CPNE3-208ENST00000614678 RPS6KC1Q96S38 1066 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 CCDC39Q9UFE4 941 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 ADAM28Q9UKQ2 775 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 GIT1Q9Y2X7 761 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 TTC26A0AVF1 554 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 BMP15O95972 392 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 GRM5P41594 1212 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 EFNA5P52803 228 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 MRPS5P82675 430 aaKnown RBP6.22□□□□□ -1.41
CPNE3-208ENST00000614678 EHHADHQ08426 723 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 STRN3Q13033 797 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 DUSP6Q16828 381 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 CCDC73Q6ZRK6 1079 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 RPGRIP1Q96KN7 1286 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 ACAP3Q96P50 834 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 UHRF1Q96T88 793 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-208ENST00000614678 CLSTN3Q9BQT9 956 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 MSTO1Q9BUK6 570 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 CRISPLD1Q9H336 500 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 PDE11AQ9HCR9 933 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 TSHZ2Q9NRE2 1034 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 ODF2LQ9ULJ1 636 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 ADRB2P07550 413 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 CTSAP10619 480 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 SMTNP53814 917 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 ARPP19P56211 112 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 KRT85P78386 507 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 NCBP1Q09161 790 aaKnown RBP6.22□□□□□ -1.41
CPNE3-208ENST00000614678 COL19A1Q14993 1142 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 PTPROQ16827 1216 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 KMT5BQ4FZB7 885 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 RARS2Q5T160 578 aaKnown RBP6.22□□□□□ -1.41
CPNE3-208ENST00000614678 DDX53Q86TM3 631 aaKnown RBP6.22□□□□□ -1.41
CPNE3-208ENST00000614678 OR5B17Q8NGF7 314 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 URGCPQ8TCY9 931 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 KCNG4Q8TDN1 519 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 KLHL5Q96PQ7 755 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 ADPGKQ9BRR6 497 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 S1PR5Q9H228 398 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 HCFC1R1Q9NWW0 138 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 STK17AQ9UEE5 414 aa6.22□□□□□ -1.41
CPNE3-208ENST00000614678 USP15Q9Y4E8 981 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-208ENST00000614678 DOCK8Q8NF50 2099 aa6.21□□□□□ -1.41
CPNE3-208ENST00000614678 MBTPS2O43462 519 aa6.21□□□□□ -1.41
CPNE3-208ENST00000614678 TADA2AO75478 443 aa6.21□□□□□ -1.41
CPNE3-208ENST00000614678 CLCN4P51793 760 aa6.21□□□□□ -1.41
CPNE3-208ENST00000614678 TUSC3Q13454 348 aa6.21□□□□□ -1.41
CPNE3-208ENST00000614678 HSP90AA2PQ14568 343 aaPredicted RBP6.21□□□□□ -1.41
CPNE3-208ENST00000614678 TJAP1Q5JTD0 557 aa6.21□□□□□ -1.41
CPNE3-208ENST00000614678 LNX1Q8TBB1 728 aaPredicted RBP6.21□□□□□ -1.41
CPNE3-208ENST00000614678 KIF12Q96FN5 646 aa6.21□□□□□ -1.41
CPNE3-208ENST00000614678 POMKQ9H5K3 350 aa6.21□□□□□ -1.41
CPNE3-208ENST00000614678 CPSF3Q9UKF6 684 aaKnown RBP6.21□□□□□ -1.41
CPNE3-208ENST00000614678 DMXL1Q9Y485 3027 aa6.21□□□□□ -1.41
CPNE3-208ENST00000614678 INPPL1O15357 1258 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 TGM5O43548 720 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 PMS1P54277 932 aaKnown RBP6.21□□□□□ -1.42
CPNE3-208ENST00000614678 DLG4P78352 724 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 KRT17Q04695 432 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 GRIK3Q13003 919 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 SMRP1Q8NCR6 262 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 POMGNT1Q8WZA1 660 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 PGLYRP2Q96PD5 576 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 MRPL9Q9BYD2 267 aaKnown RBP6.21□□□□□ -1.42
CPNE3-208ENST00000614678 CHST7Q9NS84 486 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 MUC6Q6W4X9 2439 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 PODXLO00592 558 aa6.21□□□□□ -1.42
CPNE3-208ENST00000614678 HOXA2O43364 376 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms