RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	RAD54L	Q92698	747 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PPP1R10	Q96QC0	940 aa	Known RBP	11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PAAF1	Q9BRP4	392 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	BACH2	Q9BYV9	841 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	WDR6	Q9NNW5	1121 aa	Known RBP	11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CACNG4	Q9UBN1	327 aa		11.98	□□□□□ -0.49
NPIPB4-222	ENST00000614197	REV3L	O60673	3130 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CLUH	O75153	1309 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197		H7C4K7	107 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PODXL	O00592	558 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ZMYND10	O75800	440 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	BRD1	O95696	1058 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	EFEMP2	O95967	443 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CLTA	P09496	248 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SYT1	P21579	422 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	MARCKS	P29966	332 aa	Predicted RBP	11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PPP2R3A	Q06190	1150 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	MCM6	Q14566	821 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	KARS	Q15046	597 aa	Known RBP	11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RRAGB	Q5VZM2	374 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CEP120	Q8N960	986 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	LARP4B	Q92615	738 aa	Known RBP	11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SNX27	Q96L92	541 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	REEP2	Q9BRK0	252 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PRKD2	Q9BZL6	878 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CCSER1	Q9C0I3	900 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PLEKHA5	Q9HAU0	1116 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PTPRH	Q9HD43	1115 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	IGSF9	Q9P2J2	1179 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	STK17A	Q9UEE5	414 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	FBXL21	Q9UKT6	434 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	POLI	Q9UNA4	740 aa		11.97	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TRAK2	O60296	914 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RFPL2	O75678	378 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	ASGR2	P07307	311 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	C8A	P07357	584 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PDIA4	P13667	645 aa	Known RBP	11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	KCNE1	P15382	129 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	FGFR3	P22607	806 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	PROZ	P22891	400 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	MCM4	P33991	863 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	OR1D2	P34982	312 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	DDIT3	P35638	169 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	NCKAP1L	P55160	1127 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CEBPZ	Q03701	1054 aa	Known RBP	11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	MCL1	Q07820	350 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TDG	Q13569	410 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	UPP1	Q16831	310 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	UVSSA	Q2YD98	709 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CCDC73	Q6ZRK6	1079 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RTL10	Q7L3V2	364 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TAS1R3	Q7RTX0	852 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	HSCB	Q8IWL3	235 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	APPL2	Q8NEU8	664 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	LNX1	Q8TBB1	728 aa	Predicted RBP	11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	NXPE3	Q969Y0	559 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TSPAN18	Q96SJ8	248 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	IRF2BPL	Q9H1B7	796 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	RPF1	Q9H9Y2	349 aa	Known RBP	11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	CNTN3	Q9P232	1028 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	TBX20	Q9UMR3	447 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SRPRB	Q9Y5M8	271 aa	Known RBP	11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	BACE2	Q9Y5Z0	518 aa		11.96	□□□□□ -0.49
NPIPB4-222	ENST00000614197	SYN3	O14994	580 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	STX6	O43752	255 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	FSHR	P23945	695 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	HOXA9	P31269	272 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	RAB33A	Q14088	237 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	STK38	Q15208	465 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	NAB2	Q15742	525 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	ARSH	Q5FYA8	562 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	XKR4	Q5GH76	650 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	SLFN12L	Q6IEE8	588 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	LILRA6	Q6PI73	481 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	SV2B	Q7L1I2	683 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	GET4	Q7L5D6	327 aa	Predicted RBP	11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	CD302	Q8IX05	232 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	FAM212A	Q96EL1	285 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	KIF12	Q96FN5	646 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	ZBTB45	Q96K62	511 aa	Predicted RBP	11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	ZNF396	Q96N95	335 aa	Predicted RBP	11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	CLSTN3	Q9BQT9	956 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	MSTO1	Q9BUK6	570 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	GOLGA2P5	Q9HBQ8	144 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	MTRR	Q9UBK8	725 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	FBXW11	Q9UKB1	542 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	UBQLN1	Q9UMX0	589 aa	Known RBP	11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	EXOC7	Q9UPT5	735 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	CLIC4	Q9Y696	253 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	CDY1	Q9Y6F8	540 aa		11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.95	□□□□□ -0.5
NPIPB4-222	ENST00000614197	ARHGEF37	A1IGU5	675 aa		11.94	□□□□□ -0.5
NPIPB4-222	ENST00000614197	TULP1	O00294	542 aa	Predicted RBP	11.94	□□□□□ -0.5
NPIPB4-222	ENST00000614197	PRRG1	O14668	218 aa		11.94	□□□□□ -0.5
NPIPB4-222	ENST00000614197	OGT	O15294	1046 aa		11.94	□□□□□ -0.5
NPIPB4-222	ENST00000614197	LRG1	P02750	347 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms