RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 TBCELQ5QJ74 424 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 TMEM164Q5U3C3 297 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 STRIP1Q5VSL9 837 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 GKAP1Q5VSY0 366 aaPredicted RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 PAPD7Q5XG87 772 aaKnown RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 KRT79Q5XKE5 535 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 GRAMD4Q6IC98 578 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 TTBK2Q6IQ55 1244 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 CCDC84Q86UT8 332 aaPredicted RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 ERICH1Q86X53 443 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 ESX1Q8N693 406 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 ATRIPQ8WXE1 791 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 IFT81Q8WYA0 676 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 LARP4BQ92615 738 aaKnown RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 DNAJC19Q96DA6 116 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 FGD4Q96M96 766 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 PLIN2Q99541 437 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 NAPGQ99747 312 aaPredicted RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 PSTPIP2Q9H939 334 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 CLK4Q9HAZ1 481 aaKnown RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 PARVGQ9HBI0 331 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 PARVBQ9HBI1 364 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 GTF3C4Q9UKN8 822 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 MTUS1Q9ULD2 1270 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 PLAGL2Q9UPG8 496 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 EFR3BQ9Y2G0 817 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 TIMM22Q9Y584 194 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 FRMPD2Q68DX3 1309 aaPredicted RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 CDK2AP1O14519 115 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 TBX3O15119 743 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 SUPT3HO75486 399 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 TDP2O95551 362 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 ANP32DO95626 131 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 PRLRP16471 622 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 RHOQP17081 205 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 PHKA2P46019 1235 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 CRKP46108 304 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 MTTPP55157 894 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 MARSP56192 900 aaKnown RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 POLE2P56282 527 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 CHMP4BP1P59074 171 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 GNGT1P63211 74 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 TUBA3CQ13748 450 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 SKIDA1Q1XH10 827 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 ACCSLQ4AC99 568 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 VWA3BQ502W6 1294 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 ZCWPW2Q504Y3 356 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 TRAPPC11Q7Z392 1133 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 COL23A1Q86Y22 540 aaPredicted RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 ZC3H3Q8IXZ2 948 aaKnown RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 NDUFAF2Q8N183 169 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 LRRC47Q8N1G4 583 aaKnown RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 SLC35F6Q8N357 371 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 SH3TC2Q8TF17 1288 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 GIPC2Q8TF65 315 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 DCAF4Q8WV16 495 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 WDR60Q8WVS4 1066 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 KIFAP3Q92845 792 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 VTI1AQ96AJ9 217 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 SLF1Q9BQI6 1058 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 NOC4LQ9BVI4 516 aaKnown RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 FAM192AQ9GZU8 254 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 ZCWPW1Q9H0M4 648 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 NT5C3AQ9H0P0 336 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 KCNMB3Q9NPA1 279 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 AGPAT5Q9NUQ2 364 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 RHBDL2Q9NX52 303 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 DCAF16Q9NXF7 216 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 SLC5A4Q9NY91 659 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 SCHIP1Q9P0W5 487 aaPredicted RBP7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 ACAD8Q9UKU7 415 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 PCDHA12Q9UN75 941 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 SIK3Q9Y2K2 1263 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 PCDHA2Q9Y5H9 948 aa7.16□□□□□ -1.26
CDKAL1-204ENST00000613575 CASZ1Q86V15 1759 aa7.15□□□□□ -1.26
CDKAL1-204ENST00000613575 LTBP1Q14766 1721 aa7.15□□□□□ -1.26
CDKAL1-204ENST00000613575 DDX60LQ5H9U9 1706 aaKnown RBP7.15□□□□□ -1.26
CDKAL1-204ENST00000613575 GOLGA8KD6RF30 607 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 HIP1RO75146 1068 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 PHACTR2O75167 634 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 POLR2EP19388 210 aaKnown RBP7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 CIITAP33076 1130 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 CYLC1P35663 651 aaPredicted RBP7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 BPIFB4P59827 614 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 HERVK_113P62684 666 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 NFIAQ12857 509 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 AP3B2Q13367 1082 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 PICALMQ13492 652 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 MTFR1Q15390 333 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 BCL2A1Q16548 175 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 ECM1Q16610 540 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 MAN2A1Q16706 1144 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 DACT2Q5SW24 774 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 FKBP15Q5T1M5 1219 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 NXNQ6DKJ4 435 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 STYK1Q6J9G0 422 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 NEPROQ6NW34 567 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 BTNL9Q6UXG8 535 aa7.15□□□□□ -1.27
CDKAL1-204ENST00000613575 LRRC55Q6ZSA7 311 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms