RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 TRAPPC11Q7Z392 1133 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 FAM126BQ8IXS8 530 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 TMEM192Q8IY95 271 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 CCDC170Q8IYT3 715 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 OR5B17Q8NGF7 314 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 FAM212AQ96EL1 285 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 ANKRD36BP1Q96IX9 119 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 SPAG5Q96R06 1193 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 TRAIPQ9BWF2 469 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 EIF2AQ9BY44 585 aaKnown RBP14.39□□□□□ -0.11
NEAT1-204ENST00000612303 PYCARDQ9ULZ3 195 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 BZW2Q9Y6E2 419 aaKnown RBP14.39□□□□□ -0.11
NEAT1-204ENST00000612303 TRIP11Q15643 1979 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 HTTP42858 3142 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 PTPRJQ12913 1337 aa14.39□□□□□ -0.11
NEAT1-204ENST00000612303 PHACTR2O75167 634 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 MYCP01106 439 aaPredicted RBP14.38□□□□□ -0.11
NEAT1-204ENST00000612303 TMEM191BP0C7N4 346 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 CCDC172P0C7W6 258 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 ZSCAN20P17040 1043 aaPredicted RBP14.38□□□□□ -0.11
NEAT1-204ENST00000612303 STAT1P42224 750 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 GJA8P48165 433 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 MNX1P50219 401 aaPredicted RBP14.38□□□□□ -0.11
NEAT1-204ENST00000612303 MFAP3P55082 362 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 APBA1Q02410 837 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 NFX1Q12986 1120 aaKnown RBP14.38□□□□□ -0.11
NEAT1-204ENST00000612303 LPIN1Q14693 890 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 TRAF7Q6Q0C0 670 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 ANKRD33Q7Z3H0 272 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 EFCAB13Q8IY85 973 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 HACE1Q8IYU2 909 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 JAKMIP2Q96AA8 810 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 FAXDC2Q96IV6 333 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 TOX2Q96NM4 488 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 AGO3Q9H9G7 860 aaKnown RBP14.38□□□□□ -0.11
NEAT1-204ENST00000612303 UBE2TQ9NPD8 197 aaPredicted RBP14.38□□□□□ -0.11
NEAT1-204ENST00000612303 SNTG2Q9NY99 539 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 PADI3Q9ULW8 664 aa14.38□□□□□ -0.11
NEAT1-204ENST00000612303 SSU72P8A0A1W2PR75 194 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 TULP1O00294 542 aaPredicted RBP14.37□□□□□ -0.11
NEAT1-204ENST00000612303 MEFVO15553 781 aaPredicted RBP14.37□□□□□ -0.11
NEAT1-204ENST00000612303 CCP110O43303 1012 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 ZNF500O60304 480 aaPredicted RBP14.37□□□□□ -0.11
NEAT1-204ENST00000612303 ZNF623O75123 536 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 VNN1O95497 513 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 SERPING1P05155 500 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 COL6A1P12109 1028 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 SKIP12755 728 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 FERP16591 822 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 PRKCIP41743 596 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 PIK3CAP42336 1068 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 RAB27AP51159 221 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 TFAMQ00059 246 aaKnown RBP14.37□□□□□ -0.11
NEAT1-204ENST00000612303 GCNT1Q02742 428 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 PAK2Q13177 524 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 NCOA4Q13772 614 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 DSC3Q14574 896 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 DRAP1Q14919 205 aaPredicted RBP14.37□□□□□ -0.11
NEAT1-204ENST00000612303 ASIC2Q16515 512 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 SGSM1Q2NKQ1 1148 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 XKR4Q5GH76 650 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 LMBRD2Q68DH5 695 aaPredicted RBP14.37□□□□□ -0.11
NEAT1-204ENST00000612303 TWF2Q6IBS0 349 aaKnown RBP14.37□□□□□ -0.11
NEAT1-204ENST00000612303 ALKAL1Q6UXT8 129 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 SLC39A5Q6ZMH5 540 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 HELQQ8TDG4 1101 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 TAF4BQ92750 862 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 CHP1Q99653 195 aa14.37□□□□□ -0.11
NEAT1-204ENST00000612303 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.37□□□□□ -0.11
NEAT1-204ENST00000612303 EPN1Q9Y6I3 576 aaPredicted RBP14.37□□□□□ -0.11
NEAT1-204ENST00000612303 PDCD11Q14690 1871 aaKnown RBP14.36□□□□□ -0.11
NEAT1-204ENST00000612303 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 GHRP10912 638 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 KCNE1P15382 129 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 SELPP16109 830 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 ANXA13P27216 316 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 CYLC1P35663 651 aaPredicted RBP14.36□□□□□ -0.11
NEAT1-204ENST00000612303 SOX5P35711 763 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 MAPK8IP2Q13387 824 aaPredicted RBP14.36□□□□□ -0.11
NEAT1-204ENST00000612303 TRPC3Q13507 836 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 RAPGEF1Q13905 1077 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 TMEM132DQ14C87 1099 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 ZBTB6Q15916 424 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 JADE1Q6IE81 842 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 GJB7Q6PEY0 223 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 RAD9BQ6WBX8 426 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 IRF2BP2Q7Z5L9 587 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 MRPL10Q7Z7H8 261 aaKnown RBP14.36□□□□□ -0.11
NEAT1-204ENST00000612303 ARHGEF19Q8IW93 802 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 SMG8Q8ND04 991 aaKnown RBP14.36□□□□□ -0.11
NEAT1-204ENST00000612303 SNX27Q96L92 541 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 IMPG2Q9BZV3 1241 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 MTMR12Q9C0I1 747 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 NXF3Q9H4D5 531 aaKnown RBP14.36□□□□□ -0.11
NEAT1-204ENST00000612303 C1orf112Q9NSG2 853 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 FAM105AQ9NUU6 356 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 CNTN3Q9P232 1028 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 AJAP1Q9UKB5 411 aaPredicted RBP14.36□□□□□ -0.11
NEAT1-204ENST00000612303 IPPQ9Y573 584 aa14.36□□□□□ -0.11
NEAT1-204ENST00000612303 PCDHB2Q9Y5E7 798 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms