RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 GTF3C4Q9UKN8 822 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 DDX3XO00571 662 aaKnown RBP eCLIP13.96□□□□□ -0.175e-9■■□□□ 13.6
TCF3-220ENST00000611869 GLI1P08151 1106 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 CYP11B1P15538 503 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 ITGB5P18084 799 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 ARSHQ5FYA8 562 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 MEI1Q5TIA1 1274 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 ADAM33Q9BZ11 813 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 ASNSD1Q9NWL6 643 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 PHRF1Q9P1Y6 1649 aaKnown RBP13.96□□□□□ -0.18
TCF3-220ENST00000611869 A0A087WUV0 522 aaPredicted RBP13.96□□□□□ -0.18
TCF3-220ENST00000611869 MT-ND3P03897 115 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 GTF2H1P32780 548 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 PDE1BQ01064 536 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 GEN1Q17RS7 908 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 EFCAB13Q8IY85 973 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 ANKRD13AQ8IZ07 590 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.18
TCF3-220ENST00000611869 C18orf8Q96DM3 657 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 CFAP36Q96G28 342 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 SNF8Q96H20 258 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 ERP44Q9BS26 406 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 ISCUQ9H1K1 167 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 ZNF446Q9NWS9 450 aa13.96□□□□□ -0.18
TCF3-220ENST00000611869 REXO2Q9Y3B8 237 aaKnown RBP13.96□□□□□ -0.18
TCF3-220ENST00000611869 ZNF142P52746 1687 aaPredicted RBP13.96□□□□□ -0.18
TCF3-220ENST00000611869 PDE2AO00408 941 aaPredicted RBP13.95□□□□□ -0.18
TCF3-220ENST00000611869 SDC4P31431 198 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 SLC1A1P43005 524 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 SGSM1Q2NKQ1 1148 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 ATF7IP2Q5U623 682 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 SPOPLQ6IQ16 392 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 FAM47EQ6ZV65 393 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 FAF2Q96CS3 445 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 TACO1Q9BSH4 297 aaKnown RBP13.95□□□□□ -0.18
TCF3-220ENST00000611869 DBR1Q9UK59 544 aaKnown RBP13.95□□□□□ -0.18
TCF3-220ENST00000611869 YDJCA8MPS7 323 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 KRT7P08729 469 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 DSG3P32926 999 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 CDR2Q01850 454 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 IER5Q5VY09 327 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 ZC3H18Q86VM9 953 aaKnown RBP13.95□□□□□ -0.18
TCF3-220ENST00000611869 ATL2Q8NHH9 583 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 BAP1Q92560 729 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 C9orf72Q96LT7 481 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 PIK3CDO00329 1044 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 DDNO94850 711 aaPredicted RBP13.95□□□□□ -0.18
TCF3-220ENST00000611869 CLCN3P51790 818 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 TFDP2Q14188 446 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 DSTYKQ6XUX3 929 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 ARHGEF19Q8IW93 802 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 BEST2Q8NFU1 509 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 TATDN2Q93075 761 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 HSD17B14Q9BPX1 270 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 SNX9Q9Y5X1 595 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 MYH2Q9UKX2 1941 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 GMNCA6NCL1 334 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 A8MXQ7 604 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 DYNC1LI2O43237 492 aaPredicted RBP13.95□□□□□ -0.18
TCF3-220ENST00000611869 BRAFP15056 766 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 BRD2P25440 801 aaKnown RBP13.95□□□□□ -0.18
TCF3-220ENST00000611869 ADORA2BP29275 332 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 RGS7P49802 495 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 ARSEP51690 589 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 CDH6P55285 790 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 GPAT2Q6NUI2 795 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 BTNL9Q6UXG8 535 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 ARMCX2Q7L311 632 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 CREG2Q8IUH2 290 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 DNAAF3Q8N9W5 541 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 TTC13Q8NBP0 860 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 SCFD2Q8WU76 684 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 ACAP3Q96P50 834 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 OSBPL8Q9BZF1 889 aa13.95□□□□□ -0.18
TCF3-220ENST00000611869 ASTN1O14525 1302 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 ITGA4P13612 1032 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 ARL4CP56559 192 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 MTM1Q13496 603 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 ZBED8Q8IZ13 594 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 NSMCE1Q8WV22 266 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 KAT5Q92993 513 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 FAM193BQ96PV7 902 aaPredicted RBP13.94□□□□□ -0.18
TCF3-220ENST00000611869 ZSWIM1Q9BR11 485 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 PPP1R37O75864 691 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 SLC25A27O95847 323 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 CUL2Q13617 745 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 ACAD10Q6JQN1 1059 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 CDKL2Q92772 493 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 SENP7Q9BQF6 1050 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 GCOM2Q9BZD3 368 aaPredicted RBP13.94□□□□□ -0.18
TCF3-220ENST00000611869 A1CFQ9NQ94 594 aaKnown RBP13.94□□□□□ -0.18
TCF3-220ENST00000611869 RAB21Q9UL25 225 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 HUS1O60921 280 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 ITKQ08881 620 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 PDIA2Q13087 525 aaKnown RBP13.94□□□□□ -0.18
TCF3-220ENST00000611869 NLRP14Q86W24 1093 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 MTMR12Q9C0I1 747 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 KCTD10Q9H3F6 313 aa13.94□□□□□ -0.18
TCF3-220ENST00000611869 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms