RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PRPSAP1Q14558 356 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 TMEM132BQ14DG7 1078 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 AMHR2Q16671 573 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 NOA1Q8NC60 698 aaKnown RBP7.73□□□□□ -1.17
CSDE1-218ENST00000610726 CCT6BQ92526 530 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 FAF2Q96CS3 445 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 MCEEQ96PE7 176 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 FAM118BQ9BPY3 351 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 PACSIN1Q9BY11 444 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 DNAJC18Q9H819 358 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 SMYD2Q9NRG4 433 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 SETD4Q9NVD3 440 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 CYP39A1Q9NYL5 469 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 STAP1Q9ULZ2 295 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 RRN3P2A6NIE6 340 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 PSMD10O75832 226 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 UPP2O95045 317 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 SGPL1O95470 568 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CLTAP09496 248 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 MYBL1P10243 752 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 COMTP21964 271 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CCT5P48643 541 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 SLC12A3P55017 1021 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 SNRPFP62306 86 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 ERVK-9P63128 1117 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 KYAT1Q16773 422 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 MAP7D1Q3KQU3 841 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 SPOPLQ6IQ16 392 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CCDC60Q8IWA6 550 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CACNA2D3Q8IZS8 1091 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 TTC39CQ8N584 583 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 APPL2Q8NEU8 664 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 UBA3Q8TBC4 463 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 COG1Q8WTW3 980 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 PPP1R13LQ8WUF5 828 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 DHX38Q92620 1227 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 TNFRSF25Q93038 417 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 KLRG1Q96E93 195 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 HPDLQ96IR7 371 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 THAP2Q9H0W7 228 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 GAS2O43903 313 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 PEX10O60683 326 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 RGS2P41220 211 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CPT1AP50416 773 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 SREBF2Q12772 1141 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 GKAP1Q5VSY0 366 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 FAM117BQ6P1L5 589 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 BTNL9Q6UXG8 535 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 USP50Q70EL3 339 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CENPUQ71F23 418 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 RYBPQ8N488 228 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 SMC1BQ8NDV3 1235 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 GIMAP7Q8NHV1 300 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 ZNF507Q8TCN5 953 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 URGCPQ8TCY9 931 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CCHCR1Q8TD31 782 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 COPS5Q92905 334 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CFAP36Q96G28 342 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 SCYL1Q96KG9 808 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 GLT1D1Q96MS3 346 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 MMTAG2Q9BU76 263 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 UVRAGQ9P2Y5 699 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 DBR1Q9UK59 544 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 SYNPO2Q9UMS6 1093 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CAPN6Q9Y6Q1 641 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 PARP4Q9UKK3 1724 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 TYW5A2RUC4 315 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 KLRC4O43908 158 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 SNHG28P0DPA3 235 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CPB1P15086 417 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CHRNA3P32297 505 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 GPS1Q13098 491 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 SMAD1Q15797 465 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 NOTUMQ6P988 496 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 C1orf228Q6PIY5 440 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 BBS5Q8N3I7 341 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 ATP8B4Q8TF62 1192 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CPB2Q96IY4 423 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 ZBTB45Q96K62 511 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 PKNOX2Q96KN3 472 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CFAP57Q96MR6 1250 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 OSMRQ99650 979 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 NT5C1AQ9BXI3 368 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 RBM12Q9NTZ6 932 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 KLHL14Q9P2G3 628 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 KLHL8Q9P2G9 620 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 MKRN1Q9UHC7 482 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 ZNF541Q9H0D2 1346 aa7.72□□□□□ -1.17
CSDE1-218ENST00000610726 AFDNP55196 1824 aaKnown RBP7.72□□□□□ -1.17
CSDE1-218ENST00000610726 TTI1O43156 1089 aa7.71□□□□□ -1.17
CSDE1-218ENST00000610726 TMEM253P0C7T8 217 aa7.71□□□□□ -1.17
CSDE1-218ENST00000610726 TROVE2P10155 538 aaKnown RBP eCLIP7.71□□□□□ -1.17
CSDE1-218ENST00000610726 GARTP22102 1010 aa7.71□□□□□ -1.17
CSDE1-218ENST00000610726 ADCYAP1R1P41586 468 aa7.71□□□□□ -1.17
CSDE1-218ENST00000610726 KCNJ1P48048 391 aa7.71□□□□□ -1.17
CSDE1-218ENST00000610726 LAMTOR4Q0VGL1 99 aa7.71□□□□□ -1.17
CSDE1-218ENST00000610726 ZNF484Q5JVG2 852 aa7.71□□□□□ -1.17
CSDE1-218ENST00000610726 ALS2CLQ60I27 953 aa7.71□□□□□ -1.17
CSDE1-218ENST00000610726 VPS52Q8N1B4 723 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms