RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 UNGP13051 313 aaPredicted RBP12.81□□□□□ -0.36
USP6NL-206ENST00000609853 YBX3P16989 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP6NL-206ENST00000609853 CTNNA2P26232 953 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 CARSP49589 748 aaKnown RBP12.81□□□□□ -0.36
USP6NL-206ENST00000609853 PTENP60484 403 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 POU5F1BQ06416 359 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 CUL2Q13617 745 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 PLCB4Q15147 1175 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 HSDL1Q3SXM5 330 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 MOB2Q70IA6 237 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 EEPD1Q7L9B9 569 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 EFCAB13Q8IY85 973 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 ABRAQ8N0Z2 381 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 ZNF564Q8TBZ8 553 aaPredicted RBP12.81□□□□□ -0.36
USP6NL-206ENST00000609853 IFT81Q8WYA0 676 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 SEC14L1Q92503 715 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 ZNF653Q96CK0 615 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 VCPIP1Q96JH7 1222 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 RUNDC3BQ96NL0 473 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 ACO2Q99798 780 aaKnown RBP12.81□□□□□ -0.36
USP6NL-206ENST00000609853 NUP85Q9BW27 656 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 NFKBIZQ9BYH8 718 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.81□□□□□ -0.36
USP6NL-206ENST00000609853 NFU1Q9UMS0 254 aa12.81□□□□□ -0.36
USP6NL-206ENST00000609853 GLTPD2A6NH11 291 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 ZBTB42B2RXF5 422 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 GOLGA8KD6RF30 607 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 PHACTR2O75167 634 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 VNN1O95497 513 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 TXNP10599 105 aaKnown RBP12.8□□□□□ -0.36
USP6NL-206ENST00000609853 GGCXP38435 758 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 MCL1Q07820 350 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 PPFIA1Q13136 1202 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 LAMC2Q13753 1193 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 DHX34Q14147 1143 aaKnown RBP12.8□□□□□ -0.36
USP6NL-206ENST00000609853 GPRC5AQ8NFJ5 357 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 CASKIN2Q8WXE0 1202 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 CD101Q93033 1021 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 ZBTB45Q96K62 511 aaPredicted RBP12.8□□□□□ -0.36
USP6NL-206ENST00000609853 RUFY1Q96T51 708 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 SH3GL2Q99962 352 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 PI4K2AQ9BTU6 479 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 AP1M1Q9BXS5 423 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 RAB17Q9H0T7 212 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 FAM114A2Q9NRY5 505 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 ERAP1Q9NZ08 941 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 TRPC6Q9Y210 931 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 FAN1Q9Y2M0 1017 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 UTP11Q9Y3A2 253 aaKnown RBP12.8□□□□□ -0.36
USP6NL-206ENST00000609853 PLXNA1Q9UIW2 1896 aa12.8□□□□□ -0.36
USP6NL-206ENST00000609853 FAM187AA6NFU0 413 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 AGPSO00116 658 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 ACKR2O00590 384 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 STRNO43815 780 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 RNF40O75150 1001 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 CYP1A1P04798 512 aaPredicted RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 PRKCBP05771 671 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 CLTAP09496 248 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 CETPP11597 493 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 ACO1P21399 889 aaKnown RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 COMTP21964 271 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 GBP1P32455 592 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 CTNNA1P35221 906 aaKnown RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 SLC1A1P43005 524 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 PEX5P50542 639 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 POU5F1Q01860 360 aaKnown RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 CENPCQ03188 943 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 NCOA4Q13772 614 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 ZNF484Q5JVG2 852 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 SEL1L2Q5TEA6 688 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 DCAF12L1Q5VU92 463 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 TSHZ1Q6ZSZ6 1077 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 ZNF467Q7Z7K2 595 aaPredicted RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 RNF149Q8NC42 400 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 LRRC45Q96CN5 670 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 GDAP1L1Q96MZ0 367 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 TCHPQ9BT92 498 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 DDX47Q9H0S4 455 aaKnown RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 VTA1Q9NP79 307 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■■■■ 46.6
USP6NL-206ENST00000609853 CNOT8Q9UFF9 292 aaKnown RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 PCDHA3Q9Y5H8 950 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 MAGEB2O15479 319 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 SPOPO43791 374 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 FAM189A1O60320 539 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 PROZP22891 400 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 NSFP46459 744 aaKnown RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 GCLCP48506 637 aaPredicted RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 NOP14P78316 857 aaKnown RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 MRPS25P82663 173 aaKnown RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 MESDQ14696 234 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 DUOXA2Q1HG44 320 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 LIN9Q5TKA1 542 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 WDR78Q5VTH9 848 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 FBXO16Q8IX29 292 aaPredicted RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 MCOLN2Q8IZK6 566 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 C1orf131Q8NDD1 294 aaKnown RBP12.79□□□□□ -0.36
USP6NL-206ENST00000609853 ALG3Q92685 438 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 EMID1Q96A84 441 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms