RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 SLC30A4O14863 429 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 TGM5O43548 720 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 STX6O43752 255 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 B4GALT3O60512 393 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 LRRN2O75325 713 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 ZMYND10O75800 440 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 POMCP01189 267 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 HNRNPA1P09651 372 aaKnown RBP eCLIP21.15■□□□□ 0.98
SGMS1-208ENST00000608287 MBTD1Q05BQ5 628 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 NCBP1Q09161 790 aaKnown RBP21.15■□□□□ 0.98
SGMS1-208ENST00000608287 PCBP1Q15365 356 aaKnown RBP eCLIP21.15■□□□□ 0.98
SGMS1-208ENST00000608287 USP41Q3LFD5 358 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 PPM1JQ5JR12 505 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 LIN9Q5TKA1 542 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 CDK5RAP3Q96JB5 506 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 NFKBIZQ9BYH8 718 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 MARCH5Q9NX47 278 aa21.15■□□□□ 0.98
SGMS1-208ENST00000608287 TSPAN1O60635 241 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 NCLP19338 710 aaKnown RBP21.14■□□□□ 0.97
SGMS1-208ENST00000608287 HOXA11P31270 313 aaPredicted RBP21.14■□□□□ 0.97
SGMS1-208ENST00000608287 LAIR1Q6GTX8 287 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 FAM173BQ6P4H8 233 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 PALB2Q86YC2 1186 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 COLGALT2Q8IYK4 626 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 HACE1Q8IYU2 909 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 FGF14Q92915 247 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 CLDN23Q96B33 292 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 PLIN2Q99541 437 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 POLD4Q9HCU8 107 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 PRMT8Q9NR22 394 aaPredicted RBP21.14■□□□□ 0.97
SGMS1-208ENST00000608287 CHST7Q9NS84 486 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 CLIC4Q9Y696 253 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 CHD8Q9HCK8 2581 aa21.14■□□□□ 0.97
SGMS1-208ENST00000608287 XYLBO75191 536 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 ITGA4P13612 1032 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 AXLP30530 894 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 PARM1Q6UWI2 310 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 ZNF852Q6ZMS4 543 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 KCNK18Q7Z418 384 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 ZBTB8OSQ8IWT0 167 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 CELF5Q8N6W0 485 aaKnown RBP21.13■□□□□ 0.97
SGMS1-208ENST00000608287 BSNDQ8WZ55 320 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 CPB2Q96IY4 423 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 AK8Q96MA6 479 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 PNMA5Q96PV4 448 aa21.13■□□□□ 0.97
SGMS1-208ENST00000608287 TDRD15B5MCY1 1934 aaKnown RBP21.12■□□□□ 0.97
SGMS1-208ENST00000608287 SPATA31D3P0C874 917 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 HOXA9P31269 272 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 UBA7P41226 1012 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 PPP2R5AQ15172 486 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 AMHR2Q16671 573 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 HYIQ5T013 277 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 NOTUMQ6P988 496 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 SPATA31D4Q6ZUB0 917 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 KIFAP3Q92845 792 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 CCDC51Q96ER9 411 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 IFT74Q96LB3 600 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 C2orf40Q9H1Z8 148 aa21.12■□□□□ 0.97
SGMS1-208ENST00000608287 ZSCAN16Q9H4T2 348 aaPredicted RBP21.12■□□□□ 0.97
SGMS1-208ENST00000608287 EFEMP2O95967 443 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 MYBP10242 640 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 TGM1P22735 817 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 LONP1P36776 959 aaKnown RBP21.11■□□□□ 0.97
SGMS1-208ENST00000608287 NAMPTP43490 491 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 CEBPZQ03701 1054 aaKnown RBP21.11■□□□□ 0.97
SGMS1-208ENST00000608287 GRIN1Q05586 938 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 DSC1Q08554 894 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 UBXN11Q5T124 520 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 CDCA2Q69YH5 1023 aaPredicted RBP21.11■□□□□ 0.97
SGMS1-208ENST00000608287 LILRA6Q6PI73 481 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 TAS1R1Q7RTX1 841 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 DEPTORQ8TB45 409 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 ANGPTL2Q9UKU9 493 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 CHD6Q8TD26 2715 aa21.11■□□□□ 0.97
SGMS1-208ENST00000608287 USP24Q9UPU5 2620 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 B4GALT5O43286 388 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 RETP07949 1114 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 ARF4P18085 180 aaPredicted RBP21.1■□□□□ 0.97
SGMS1-208ENST00000608287 LIG1P18858 919 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 ADCY1Q08828 1119 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 PPM1LQ5SGD2 360 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 RINT1Q6NUQ1 792 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 FUT10Q6P4F1 479 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 TPRG1Q6ZUI0 275 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 GRASPQ7Z6J2 395 aaPredicted RBP21.1■□□□□ 0.97
SGMS1-208ENST00000608287 KCTD17Q8N5Z5 321 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 SPRYD3Q8NCJ5 442 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 FGF13Q92913 245 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 CALML4Q96GE6 196 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 RUSC1Q9BVN2 902 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 EIF2AQ9BY44 585 aaKnown RBP21.1■□□□□ 0.97
SGMS1-208ENST00000608287 CSRNP2Q9H175 543 aa21.1■□□□□ 0.97
SGMS1-208ENST00000608287 PRMT7Q9NVM4 692 aaPredicted RBP21.1■□□□□ 0.97
SGMS1-208ENST00000608287 SLC26A4O43511 780 aa21.09■□□□□ 0.97
SGMS1-208ENST00000608287 HIP1RO75146 1068 aa21.09■□□□□ 0.97
SGMS1-208ENST00000608287 POU2F2P09086 479 aa21.09■□□□□ 0.97
SGMS1-208ENST00000608287 MARCKSP29966 332 aaPredicted RBP21.09■□□□□ 0.97
SGMS1-208ENST00000608287 PTPAQ15257 358 aa21.09■□□□□ 0.97
SGMS1-208ENST00000608287 TMEM132AQ24JP5 1023 aa21.09■□□□□ 0.97
SGMS1-208ENST00000608287 TMEM119Q4V9L6 283 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms