RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 MRPS23Q9Y3D9 190 aaKnown RBP16.33■□□□□ 0.2
CTSA-216ENST00000607212 USP34Q70CQ2 3546 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 PRRG1O14668 218 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 MUTP22033 750 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 FGFR3P22607 806 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 HOXA9P31269 272 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 BRCC3P46736 316 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 RBM25P49756 843 aaKnown RBP16.32■□□□□ 0.2
CTSA-216ENST00000607212 PFKPQ01813 784 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 ST3GAL1Q11201 340 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 DMP1Q13316 513 aaPredicted RBP16.32■□□□□ 0.2
CTSA-216ENST00000607212 RAB33AQ14088 237 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 NBR1Q14596 966 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 ZRSR1Q15695 479 aaKnown RBP16.32■□□□□ 0.2
CTSA-216ENST00000607212 MLF2Q15773 248 aaPredicted RBP16.32■□□□□ 0.2
CTSA-216ENST00000607212 NT5DC1Q5TFE4 455 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 MCRS1Q96EZ8 462 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 NUB1Q9Y5A7 615 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 STK24Q9Y6E0 443 aa16.32■□□□□ 0.2
CTSA-216ENST00000607212 PHLPP2Q6ZVD8 1323 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 LAMTOR5O43504 91 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 LRRN2O75325 713 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 PAPLNO95428 1278 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 SP9P0CG40 484 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 MATR3P43243 847 aaKnown RBP eCLIP16.31■□□□□ 0.2
CTSA-216ENST00000607212 HMGN5P82970 282 aaKnown RBP16.31■□□□□ 0.2
CTSA-216ENST00000607212 NAB2Q15742 525 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 ECM1Q16610 540 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 UVSSAQ2YD98 709 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 SLC44A4Q53GD3 710 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 KIAA2013Q8IYS2 634 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 DDX27Q96GQ7 796 aaKnown RBP16.31■□□□□ 0.2
CTSA-216ENST00000607212 PPP1R10Q96QC0 940 aaKnown RBP16.31■□□□□ 0.2
CTSA-216ENST00000607212 MRPL4Q9BYD3 311 aaKnown RBP16.31■□□□□ 0.2
CTSA-216ENST00000607212 KMT5AQ9NQR1 393 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 SLC38A7Q9NVC3 462 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 PPP4R2Q9NY27 417 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 DNMT3BQ9UBC3 853 aaKnown RBP16.31■□□□□ 0.2
CTSA-216ENST00000607212 DNM3Q9UQ16 869 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 TNFSF13BQ9Y275 285 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 RIF1Q5UIP0 2472 aaKnown RBP16.31■□□□□ 0.2
CTSA-216ENST00000607212 CITO14578 2027 aa16.31■□□□□ 0.2
CTSA-216ENST00000607212 SMIM28A0A1B0GU29 152 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 KANSL1LA0AUZ9 987 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 TMEM189-UBE2V1I3L0A0 370 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 PODXLO00592 558 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 FXR2P51116 673 aaKnown RBP eCLIP16.3■□□□□ 0.2
CTSA-216ENST00000607212 STARD6P59095 220 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 UPP1Q16831 310 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 KRT79Q5XKE5 535 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 NPAS3Q8IXF0 933 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 CEP120Q8N960 986 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 LLPHQ9BRT6 129 aaKnown RBP16.3■□□□□ 0.2
CTSA-216ENST00000607212 CDT1Q9H211 546 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 CYP4F11Q9HBI6 524 aa16.3■□□□□ 0.2
CTSA-216ENST00000607212 MYH11P35749 1972 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 FAM170BA6NMN3 283 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 E9PMD0 336 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 H7C4K7 107 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 KINO60870 393 aaKnown RBP16.29■□□□□ 0.2
CTSA-216ENST00000607212 HIP1RO75146 1068 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 RHOP08100 348 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 CD72P21854 359 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 GRM5P41594 1212 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 TRAPPC10P48553 1259 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 PRKCQQ04759 706 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 VARS2Q5ST30 1063 aaKnown RBP16.29■□□□□ 0.2
CTSA-216ENST00000607212 RSPO2Q6UXX9 243 aaPredicted RBP16.29■□□□□ 0.2
CTSA-216ENST00000607212 TPRG1Q6ZUI0 275 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 ELMOD1Q8N336 334 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 FBXO18Q8NFZ0 1043 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 DRC1Q96MC2 740 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 ACAP3Q96P50 834 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 CORO1BQ9BR76 489 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 TARS2Q9BW92 718 aaKnown RBP16.29■□□□□ 0.2
CTSA-216ENST00000607212 ANKFY1Q9P2R3 1169 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 KCNH3Q9ULD8 1083 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 BACE2Q9Y5Z0 518 aa16.29■□□□□ 0.2
CTSA-216ENST00000607212 PTPN2P17706 415 aa16.28■□□□□ 0.2
CTSA-216ENST00000607212 IGFBP6P24592 240 aaPredicted RBP16.28■□□□□ 0.2
CTSA-216ENST00000607212 MCM4P33991 863 aa16.28■□□□□ 0.2
CTSA-216ENST00000607212 NPTX2P47972 431 aa16.28■□□□□ 0.2
CTSA-216ENST00000607212 ROR1Q01973 937 aa16.28■□□□□ 0.2
CTSA-216ENST00000607212 STRN3Q13033 797 aa16.28■□□□□ 0.2
CTSA-216ENST00000607212 PTGDRQ13258 359 aa16.28■□□□□ 0.2
CTSA-216ENST00000607212 ERMP1Q7Z2K6 904 aa16.28■□□□□ 0.2
CTSA-216ENST00000607212 C3orf58Q8NDZ4 430 aa16.28■□□□□ 0.2
CTSA-216ENST00000607212 ZSCAN31Q96LW9 406 aaPredicted RBP16.28■□□□□ 0.2
CTSA-216ENST00000607212 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
CTSA-216ENST00000607212 DLGAP2Q9P1A6 1054 aa16.28■□□□□ 0.2
CTSA-216ENST00000607212 DAXXQ9UER7 740 aaPredicted RBP16.28■□□□□ 0.2
CTSA-216ENST00000607212 COL4A3Q01955 1670 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 PP2D1A8MPX8 630 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 SLC16A4O15374 487 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 NCAM2O15394 837 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 POU2F2P09086 479 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 GLULP15104 373 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 CEBPBP17676 345 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 MARCKSP29966 332 aaPredicted RBP16.27■□□□□ 0.2
CTSA-216ENST00000607212 CSTF1Q05048 431 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms