RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 OLIG1Q8TAK6 271 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 SHC3Q92529 594 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 RPF1Q9H9Y2 349 aaKnown RBP20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 C1orf112Q9NSG2 853 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 SMIM35A0A1B0GVV1 85 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 TFRCP02786 760 aaKnown RBP20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 STAG3L1P0CL83 205 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 CCND3P30281 292 aaPredicted RBP20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 NCOA4Q13772 614 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 TAF3Q5VWG9 929 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 SRGAP1Q7Z6B7 1085 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 PALB2Q86YC2 1186 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 WDR49Q8IV35 697 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 FMNL3Q8IVF7 1028 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 VTI1AQ96AJ9 217 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 AGPAT1Q99943 283 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 KATNAL1Q9BW62 490 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 CARD6Q9BX69 1037 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 APOBEC3GQ9HC16 384 aaKnown RBP20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 MRFAP1Q9Y605 127 aa20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 TRIP12Q14669 1992 aaPredicted RBP20.67■□□□□ 0.9
TUBB4B-202ENST00000604929 C17orf102A2RUQ5 167 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 CALCAP01258 141 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 ATP1A1P05023 1023 aaKnown RBP20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 KRT5P13647 590 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 GJA9P57773 515 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 DUOXA2Q1HG44 320 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 TRAPPC11Q7Z392 1133 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 TXLNBQ8N3L3 684 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 CD99L2Q8TCZ2 262 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 SYT11Q9BT88 431 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 GCOM2Q9BZD3 368 aaPredicted RBP20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 A0A1B0GUA9 196 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 SEPT4O43236 478 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 ZC3H11AO75152 810 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■■■■□ 22.7
TUBB4B-202ENST00000604929 RARBP10826 455 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 C10orf76Q5T2E6 689 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 EFCAB13Q8IY85 973 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 TMEM130Q8N3G9 435 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 TAS2R14Q9NYV8 317 aa20.66■□□□□ 0.9
TUBB4B-202ENST00000604929 CTIFO43310 598 aaKnown RBP20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 TACC1O75410 805 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 MCF2P10911 925 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 PRKAR2AP13861 404 aaKnown RBP20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 GCNT1Q02742 428 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 NOP9Q86U38 636 aaKnown RBP20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 RPUSD2Q8IZ73 545 aaKnown RBP20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 NUB1Q9Y5A7 615 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 LACTBL1A8MY62 500 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 ANXA13P27216 316 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 CATSPER4Q7RTX7 472 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 REM2Q8IYK8 340 aaPredicted RBP20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 TRIM58Q8NG06 486 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 NOX5Q96PH1 765 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 SPC25Q9HBM1 224 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 NENFQ9UMX5 172 aa20.65■□□□□ 0.9
TUBB4B-202ENST00000604929 MYH10P35580 1976 aa20.64■□□□□ 0.9
TUBB4B-202ENST00000604929 UMODL1Q5DID0 1318 aa20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 MEFVO15553 781 aaPredicted RBP20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 SRGAP2O75044 1071 aa20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 H2AFZP0C0S5 128 aa20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 TMEM191BP0C7N4 346 aa20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 GALCP54803 685 aa20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 MYL6P60660 151 aa20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 SURF1Q15526 300 aa20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 H2AFVQ71UI9 128 aa20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 EPS8L1Q8TE68 723 aa20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 TMEM40Q8WWA1 233 aa20.64■□□□□ 0.89
TUBB4B-202ENST00000604929 CLTAP09496 248 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 CYP11B1P15538 503 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 ABCB4P21439 1286 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 HOXA11P31270 313 aaPredicted RBP20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 NOP2P46087 812 aaKnown RBP20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 VEGFBP49765 207 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 AP3M2P53677 418 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 NOP14P78316 857 aaKnown RBP20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 CDC42EP1Q00587 391 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 NBPF20Q3BBV1 942 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 RNF10Q8N5U6 811 aaKnown RBP20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 MNS1Q8NEH6 495 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 MTG1Q9BT17 334 aaPredicted RBP20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 XPNPEP3Q9NQH7 507 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 CDC23Q9UJX2 597 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 B4GALT4O60513 344 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 MMEP08473 750 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 GNAT1P11488 350 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 CHRNB2P17787 502 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 EIF4BP23588 611 aaKnown RBP20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 TRPC3Q13507 836 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 CUL2Q13617 745 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 SLC10A6Q3KNW5 377 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 ENOSF1Q7L5Y1 443 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 ZNF784Q8NCA9 323 aaPredicted RBP20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 PCDHB18PQ96TA0 734 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 ADPGKQ9BRR6 497 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 SRRDQ9UH36 339 aa20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 NOCTQ9UK39 431 aaKnown RBP20.63■□□□□ 0.89
TUBB4B-202ENST00000604929 DYNC1I1O14576 645 aa20.62■□□□□ 0.89
TUBB4B-202ENST00000604929 NFICP08651 508 aa20.62■□□□□ 0.89
TUBB4B-202ENST00000604929 KRT19P08727 400 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms