RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PLEKP08567 350 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 STAG3L1P0CL83 205 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 HOXA11P31270 313 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ATICP31939 592 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TNFSF9P41273 254 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ARHGAP25P42331 645 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 BPIFB4P59827 614 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 APBA1Q02410 837 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PTK2Q05397 1052 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 KIF5AQ12840 1032 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PTK7Q13308 1070 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 HIC1Q14526 733 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 KCNA10Q16322 511 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ZBTB41Q5SVQ8 909 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PPP1R2P3Q6NXS1 205 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CXCL17Q6UXB2 119 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ZBTB33Q86T24 672 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ZNF677Q86XU0 584 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ARHGEF19Q8IW93 802 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PPM1KQ8N3J5 372 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 RNF10Q8N5U6 811 aaKnown RBP13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 UBE2Q2Q8WVN8 375 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 POP1Q99575 1024 aaKnown RBP13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CELF4Q9BZC1 486 aaKnown RBP13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TOPORSQ9NS56 1045 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 AJAP1Q9UKB5 411 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CNTN6Q9UQ52 1028 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PCDHA13Q9Y5I0 950 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TRPV2Q9Y5S1 764 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ZNF263O14978 683 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 VNN1O95497 513 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TMEM191BP0C7N4 346 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 WNT7BP56706 349 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 YWHAEP62258 255 aaKnown RBP13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 BIRC3Q13489 604 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 NCOA4Q13772 614 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 NAB2Q15742 525 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SGSM1Q2NKQ1 1148 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TRAPPC11Q7Z392 1133 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ZNF571Q7Z3V5 609 aaPredicted RBP13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 THNSL1Q8IYQ7 743 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TTC39CQ8N584 583 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 USP38Q8NB14 1042 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ARRDC4Q8NCT1 418 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SLC30A5Q8TAD4 765 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 KREMEN1Q96MU8 473 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ACAP3Q96P50 834 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 OSMRQ99650 979 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 BEGAINQ9BUH8 593 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CHST12Q9NRB3 414 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ITGA11Q9UKX5 1188 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TDRD15B5MCY1 1934 aaKnown RBP13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TANC1Q9C0D5 1861 aa13.23□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 A0A0A6YYK5 440 aaPredicted RBP13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ANO9A1A5B4 782 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 FOXN3O00409 490 aaPredicted RBP13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PHACTR2O75167 634 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CXCL8P10145 99 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 HARSP12081 509 aaKnown RBP13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 GZMAP12544 262 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 MAGEA1P43355 309 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ACLYP53396 1101 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 NOP14P78316 857 aaKnown RBP13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 MGAT3Q09327 533 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 FAM26DQ5JW98 314 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CCDC122Q5T0U0 273 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 LHX8Q68G74 356 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 GJB7Q6PEY0 223 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SLC43A3Q8NBI5 491 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 OR5B17Q8NGF7 314 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 GLT1D1Q96MS3 346 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TRAIPQ9BWF2 469 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SENP6Q9GZR1 1112 aaPredicted RBP13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 NAGPAQ9UK23 515 aa13.22□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 A0A087X0T9 212 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 XPOTO43592 962 aaKnown RBP13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 FAM228BP0C875 321 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 YARSP54577 528 aaKnown RBP13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 GFPT1Q06210 699 aaPredicted RBP13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CUL2Q13617 745 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ITGA7Q13683 1181 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TMEM132DQ14C87 1099 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 IFI16Q16666 785 aaKnown RBP13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ARHGAP44Q17R89 818 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SLC10A6Q3KNW5 377 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 XKR4Q5GH76 650 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 EFCAB13Q8IY85 973 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TRIM58Q8NG06 486 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 EPS8L1Q8TE68 723 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CPB2Q96IY4 423 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ZNF668Q96K58 619 aaPredicted RBP13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 MTMR12Q9C0I1 747 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 NIF3L1Q9GZT8 377 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 L2HGDHQ9H9P8 463 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 LZTFL1Q9NQ48 299 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CNTN3Q9P232 1028 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ADAMTS1Q9UHI8 967 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PHF24Q9UPV7 400 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms