RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 MATR3P43243 847 aaKnown RBP eCLIP17.91■□□□□ 0.46
TUBE1-206ENST00000603722 CEBPZQ03701 1054 aaKnown RBP17.91■□□□□ 0.46
TUBE1-206ENST00000603722 SPECC1Q5M775 1068 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 CD300LGQ6UXG3 332 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 OTOP3Q7RTS5 596 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 HAUS6Q7Z4H7 955 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 BMP8AQ7Z5Y6 402 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 PLCD3Q8N3E9 789 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 MYCT1Q8N699 235 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 SMG7Q92540 1137 aaKnown RBP17.91■□□□□ 0.46
TUBE1-206ENST00000603722 ZNF707Q96C28 371 aaPredicted RBP17.91■□□□□ 0.46
TUBE1-206ENST00000603722 EPSTI1Q96J88 318 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 ZHX3Q9H4I2 956 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 PARVGQ9HBI0 331 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 SLC38A7Q9NVC3 462 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 ZDHHC7Q9NXF8 308 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 FBXO2Q9UK22 296 aaPredicted RBP17.91■□□□□ 0.46
TUBE1-206ENST00000603722 FBXW11Q9UKB1 542 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 CLUHO75153 1309 aa17.91■□□□□ 0.46
TUBE1-206ENST00000603722 PODXLO00592 558 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 CLDN3O15551 220 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 ADAM12O43184 909 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 KCNE1P15382 129 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 FGFR3P22607 806 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 BRCC3P46736 316 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 MCL1Q07820 350 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 PDXDC1Q6P996 788 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 CYP26C1Q6V0L0 522 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 USP49Q70CQ1 688 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 SUGP1Q8IWZ8 645 aaKnown RBP17.9■□□□□ 0.46
TUBE1-206ENST00000603722 LARP4BQ92615 738 aaKnown RBP17.9■□□□□ 0.46
TUBE1-206ENST00000603722 C18orf25Q96B23 403 aaPredicted RBP17.9■□□□□ 0.46
TUBE1-206ENST00000603722 RHOBTB2Q9BYZ6 727 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 CCSER1Q9C0I3 900 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 PIDD1Q9HB75 910 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 WDR6Q9NNW5 1121 aaKnown RBP17.9■□□□□ 0.46
TUBE1-206ENST00000603722 MTMR6Q9Y217 621 aa17.9■□□□□ 0.46
TUBE1-206ENST00000603722 TRAPPC3O43617 180 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 TBCAO75347 108 aaKnown RBP17.89■□□□□ 0.45
TUBE1-206ENST00000603722 TKTP29401 623 aaKnown RBP17.89■□□□□ 0.45
TUBE1-206ENST00000603722 LIG4P49917 911 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 ZNF131P52739 623 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 LIN9Q5TKA1 542 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 UBALD2Q8IYN6 164 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 STAMQ92783 540 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 DDX27Q96GQ7 796 aaKnown RBP17.89■□□□□ 0.45
TUBE1-206ENST00000603722 CLIC6Q96NY7 704 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 PRKD2Q9BZL6 878 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 HAPLN2Q9GZV7 340 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 MTRRQ9UBK8 725 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 TBX20Q9UMR3 447 aa17.89■□□□□ 0.45
TUBE1-206ENST00000603722 SRPRBQ9Y5M8 271 aaKnown RBP17.89■□□□□ 0.45
TUBE1-206ENST00000603722 HNRNPDLO14979 420 aaKnown RBP17.88■□□□□ 0.45
TUBE1-206ENST00000603722 TRAK2O60296 914 aa17.88■□□□□ 0.45
TUBE1-206ENST00000603722 N4BP1O75113 896 aaKnown RBP17.88■□□□□ 0.45
TUBE1-206ENST00000603722 ZMYND10O75800 440 aa17.88■□□□□ 0.45
TUBE1-206ENST00000603722 PAPLNO95428 1278 aa17.88■□□□□ 0.45
TUBE1-206ENST00000603722 C8AP07357 584 aa17.88■□□□□ 0.45
TUBE1-206ENST00000603722 CXCL8P10145 99 aa17.88■□□□□ 0.45
TUBE1-206ENST00000603722 GBP2P32456 591 aaPredicted RBP17.88■□□□□ 0.45
TUBE1-206ENST00000603722 SLC10A6Q3KNW5 377 aa17.88■□□□□ 0.45
TUBE1-206ENST00000603722 FBXL6Q8N531 539 aa17.88■□□□□ 0.45
TUBE1-206ENST00000603722 KCNN1Q92952 543 aa17.88■□□□□ 0.45
TUBE1-206ENST00000603722 TUBGCP4Q9UGJ1 667 aa17.88■□□□□ 0.45
TUBE1-206ENST00000603722 CDY1Q9Y6F8 540 aa17.88■□□□□ 0.45
TUBE1-206ENST00000603722 TRIOO75962 3097 aa17.87■□□□□ 0.45
TUBE1-206ENST00000603722 STX6O43752 255 aa17.87■□□□□ 0.45
TUBE1-206ENST00000603722 PDGFBP01127 241 aaPredicted RBP17.87■□□□□ 0.45
TUBE1-206ENST00000603722 OR1D2P34982 312 aa17.87■□□□□ 0.45
TUBE1-206ENST00000603722 DDIT3P35638 169 aa17.87■□□□□ 0.45
TUBE1-206ENST00000603722 TXLNAP40222 546 aa17.87■□□□□ 0.45
TUBE1-206ENST00000603722 SPAG1Q07617 926 aa17.87■□□□□ 0.45
TUBE1-206ENST00000603722 RSPO2Q6UXX9 243 aaPredicted RBP17.87■□□□□ 0.45
TUBE1-206ENST00000603722 ANKS3Q6ZW76 656 aa17.87■□□□□ 0.45
TUBE1-206ENST00000603722 GET4Q7L5D6 327 aaPredicted RBP17.87■□□□□ 0.45
TUBE1-206ENST00000603722 USP28Q96RU2 1077 aa17.87■□□□□ 0.45
TUBE1-206ENST00000603722 CCDC39Q9UFE4 941 aa17.87■□□□□ 0.45
TUBE1-206ENST00000603722 NUB1Q9Y5A7 615 aa17.87■□□□□ 0.45
TUBE1-206ENST00000603722 TDRD15B5MCY1 1934 aaKnown RBP17.87■□□□□ 0.45
TUBE1-206ENST00000603722 CLTAP09496 248 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 SCP2P22307 547 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 NMT1P30419 496 aaKnown RBP17.86■□□□□ 0.45
TUBE1-206ENST00000603722 RPL9P32969 192 aaKnown RBP17.86■□□□□ 0.45
TUBE1-206ENST00000603722 TNFSF9P41273 254 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 RAB33AQ14088 237 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 PPM1LQ5SGD2 360 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 ZBTB41Q5SVQ8 909 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 RRAGBQ5VZM2 374 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 KRI1Q8N9T8 703 aaKnown RBP17.86■□□□□ 0.45
TUBE1-206ENST00000603722 SLC7A14Q8TBB6 771 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 MYADMQ96S97 322 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 FIZ1Q96SL8 496 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 ZSCAN16Q9H4T2 348 aaPredicted RBP17.86■□□□□ 0.45
TUBE1-206ENST00000603722 KCNK12Q9HB15 430 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 BACE2Q9Y5Z0 518 aa17.86■□□□□ 0.45
TUBE1-206ENST00000603722 CCL16O15467 120 aa17.85■□□□□ 0.45
TUBE1-206ENST00000603722 PIGRP01833 764 aa17.85■□□□□ 0.45
TUBE1-206ENST00000603722 HNRNPA1P09651 372 aaKnown RBP eCLIP17.85■□□□□ 0.45
TUBE1-206ENST00000603722 VCPP55072 806 aaKnown RBP17.85■□□□□ 0.45
TUBE1-206ENST00000603722 PPP2R3AQ06190 1150 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms