RNA–Protein interactions for RNA: ENST00000602174.5

NAPA-222, Transcript of NSF attachment protein alpha, human

TSL 2

Gene NAPA, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAPA-222	ENST00000602174	UBXN11	Q5T124	520 aa		12	□□□□□ -0.49
NAPA-222	ENST00000602174	GPD1L	Q8N335	351 aa		12	□□□□□ -0.49
NAPA-222	ENST00000602174	APBB2	Q92870	758 aa		12	□□□□□ -0.49
NAPA-222	ENST00000602174	CNOT6L	Q96LI5	555 aa	Known RBP	12	□□□□□ -0.49
NAPA-222	ENST00000602174	MSTO1	Q9BUK6	570 aa		12	□□□□□ -0.49
NAPA-222	ENST00000602174	NSUN3	Q9H649	340 aa	Known RBP	12	□□□□□ -0.49
NAPA-222	ENST00000602174	C19orf67	A6NJJ6	358 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	PRR33	A8MZF0	331 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	C5orf67	F2Z3F1	127 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	EXOC3	O60645	756 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	ADRB2	P07550	413 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	EPB41	P11171	864 aa	Known RBP	11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	SSTR3	P32745	418 aa	Predicted RBP	11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	CTNNB1	P35222	781 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.99	□□□□□ -0.49	2e-8	■■■■■ 27.2
NAPA-222	ENST00000602174	PSMC2	P35998	433 aa	Known RBP	11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	BMPR1A	P36894	532 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	GRM5	P41594	1212 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	CASP4	P49662	377 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	RAB27A	P51159	221 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	HYAL1	Q12794	435 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	CAMK1	Q14012	370 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	SNRNP35	Q16560	246 aa	Known RBP	11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	TMEM132A	Q24JP5	1023 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	CTC1	Q2NKJ3	1217 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	FRMD5	Q7Z6J6	570 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	BRSK2	Q8IWQ3	736 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	TRIM59	Q8IWR1	403 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	FAM186B	Q8IYM0	893 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	FIBCD1	Q8N539	461 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	ZNF689	Q96CS4	500 aa	Predicted RBP	11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	SAAL1	Q96ER3	474 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	BORCS6	Q96GS4	357 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	FTHL17	Q9BXU8	183 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	TMX1	Q9H3N1	280 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	PCIF1	Q9H4Z3	704 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	METTL14	Q9HCE5	456 aa	Known RBP	11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	CLDND1	Q9NY35	253 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	CPSF3	Q9UKF6	684 aa	Known RBP	11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	FRMD4B	Q9Y2L6	1034 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	ANK1	P16157	1881 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	TECTA	O75443	2155 aa		11.99	□□□□□ -0.49
NAPA-222	ENST00000602174	PLXNA4	Q9HCM2	1894 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	GOLGA6L3	A6NEY3	463 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	KCNJ18	B7U540	433 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	LINC01565	O15544	149 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	MGEA5	O60502	916 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	NPTXR	O95502	500 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	CLTA	P09496	248 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	ATP1A3	P13637	1013 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	PPP2R3A	Q06190	1150 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	NFX1	Q12986	1120 aa	Known RBP	11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	KCNJ12	Q14500	433 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	GSE1	Q14687	1217 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	TCP11X2	Q5H9J9	407 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	CEP135	Q66GS9	1140 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	SARM1	Q6SZW1	724 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	EP400NL	Q6ZTU2	488 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	INTS8	Q75QN2	995 aa	Known RBP	11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	APTX	Q7Z2E3	356 aa	Known RBP	11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	CDR2L	Q86X02	465 aa	Predicted RBP	11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	CBWD2	Q8IUF1	395 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	CRIPAK	Q8N1N5	446 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	ZSWIM2	Q8NEG5	633 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	CLP1	Q92989	425 aa	Known RBP	11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	MFSD14A	Q96MC6	490 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	TCHP	Q9BT92	498 aa		11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	EIF2A	Q9BY44	585 aa	Known RBP	11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	LIMA1	Q9UHB6	759 aa	Known RBP	11.98	□□□□□ -0.49
NAPA-222	ENST00000602174	PDCD11	Q14690	1871 aa	Known RBP	11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	GOLGA8IP	A6NC78	632 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	LRRC10B	A6NIK2	292 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	ZNF233	A6NK53	670 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	GOLGA8J	A6NMD2	632 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	ZNF623	O75123	536 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	TBX10	O75333	385 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	CSPG5	O95196	566 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	RB1	P06400	928 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	HARS	P12081	509 aa	Known RBP	11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	ZSCAN20	P17040	1043 aa	Predicted RBP	11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	DNAJB1	P25685	340 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	IRS1	P35568	1242 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	MATR3	P43243	847 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	CYP24A1	Q07973	514 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	BFSP1	Q12934	665 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	PSMD6	Q15008	389 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	KRT31	Q15323	416 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	CLUL1	Q15846	466 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	PUS10	Q3MIT2	529 aa	Known RBP	11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	CCDC40	Q4G0X9	1142 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	ZBTB41	Q5SVQ8	909 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	TWF2	Q6IBS0	349 aa	Known RBP	11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	ZBTB33	Q86T24	672 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	CEP120	Q8N960	986 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	ANKRD20A12P	Q8NF67	263 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	TMC2	Q8TDI7	906 aa		11.97	□□□□□ -0.49
NAPA-222	ENST00000602174	EEF2KMT	Q96G04	330 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms