RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 GDAQ9Y2T3 454 aa19.58■□□□□ 0.72
SHKBP1-227ENST00000602011 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-227ENST00000602011 TTLL13PA6NNM8 815 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 LIG1P18858 919 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 RPL9P32969 192 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 GRM5P41594 1212 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 MAGEA9P43362 315 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 GUCY1B3Q02153 619 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 XKR4Q5GH76 650 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 NT5DC1Q5TFE4 455 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 C4orf32Q8N8J7 132 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 HASPINQ8TF76 798 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 FGF13Q92913 245 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 DRC1Q96MC2 740 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 NELL2Q99435 816 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 GDE1Q9NZC3 331 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 MAFFQ9ULX9 164 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 DOCK6Q96HP0 2047 aa19.57■□□□□ 0.72
SHKBP1-227ENST00000602011 COL4A3Q01955 1670 aa19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 LMNAP02545 664 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 U2AF2P26368 475 aaKnown RBP eCLIP19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 KRT79Q5XKE5 535 aa19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 EEF1DP3Q658K8 133 aa19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 ALKAL1Q6UXT8 129 aa19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 ERMP1Q7Z2K6 904 aa19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 C1orf210Q8IVY1 113 aa19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 IGSF22Q8N9C0 903 aa19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 ZNF461Q8TAF7 563 aa19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 SLC7A14Q8TBB6 771 aa19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 NTPCRQ9BSD7 190 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 MRPL4Q9BYD3 311 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-227ENST00000602011 CACNA1AO00555 2505 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 SMIM28A0A1B0GU29 152 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 SYN3O14994 580 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 LRRN2O75325 713 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 ELF1P32519 619 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 PRPHP41219 470 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 CLCNKBP51801 687 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 ST3GAL1Q11201 340 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 DMP1Q13316 513 aaPredicted RBP19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 PABPC1LQ4VXU2 614 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 CCDC83Q8IWF9 413 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 KIAA2013Q8IYS2 634 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 RMDN1Q96DB5 314 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 ACO2Q99798 780 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 RPP25Q9BUL9 199 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 FOXQ1Q9C009 403 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 PTPRHQ9HD43 1115 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 DDX19AQ9NUU7 478 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 DLGAP2Q9P1A6 1054 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 POLIQ9UNA4 740 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 KIF3AQ9Y496 699 aa19.55■□□□□ 0.72
SHKBP1-227ENST00000602011 FRYLO94915 3013 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 KANSL1LA0AUZ9 987 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 CCDC169A6NNP5 214 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 H7C4K7 107 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 CCL16O15467 120 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 MICAL2O94851 1124 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 MCF2P10911 925 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 KCNE1P15382 129 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 NPTX2P47972 431 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 GPC5P78333 572 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 SLC8B1Q6J4K2 584 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 PARM1Q6UWI2 310 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 PJA1Q8NG27 643 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 SNX29Q8TEQ0 813 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 FGF14Q92915 247 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 ACAP3Q96P50 834 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 BCO2Q9BYV7 579 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 CDY1Q9Y6F8 540 aa19.54■□□□□ 0.72
SHKBP1-227ENST00000602011 ARHGEF37A1IGU5 675 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 ZNF197O14709 1029 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 NCAM2O15394 837 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 GLULP15104 373 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 PTPN2P17706 415 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 PEX3P56589 373 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 NTHL1P78549 312 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 PTGDRQ13258 359 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 ECM1Q16610 540 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 ZNF528Q3MIS6 628 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 SLC44A4Q53GD3 710 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 TPGS2Q68CL5 300 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 DTHD1Q6ZMT9 781 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 TCHPQ9BT92 498 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 DDX23Q9BUQ8 820 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 KMT5AQ9NQR1 393 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 ARHGAP28Q9P2N2 729 aa19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 MRPS23Q9Y3D9 190 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-227ENST00000602011 MED19A0JLT2 244 aaPredicted RBP19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 ADAM12O43184 909 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 ECI2O75521 394 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 ABLIM3O94929 683 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 CENPBP07199 599 aaPredicted RBP19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 ATF2P15336 505 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 SCP2P22307 547 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 SMTNP53814 917 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 MLF2Q15773 248 aaPredicted RBP19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 ZNF568Q3ZCX4 644 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 CD300LGQ6UXG3 332 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 DCLK2Q8N568 766 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms