RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 GPBP1Q86WP2 473 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 CEP57Q86XR8 500 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 UBALD2Q8IYN6 164 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 C3orf58Q8NDZ4 430 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 RAD54LQ92698 747 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 PBXIP1Q96AQ6 731 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 ACAP3Q96P50 834 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 CCSER1Q9C0I3 900 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 KCNH6Q9H252 994 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 WDR6Q9NNW5 1121 aaKnown RBP24.8■■□□□ 1.56
SSBP4-209ENST00000601357 LIMD1Q9UGP4 676 aa24.8■■□□□ 1.56
SSBP4-209ENST00000601357 KMT2EQ8IZD2 1858 aa24.79■■□□□ 1.56
SSBP4-209ENST00000601357 H0YCG3 227 aa24.79■■□□□ 1.56
SSBP4-209ENST00000601357 MCL1Q07820 350 aa24.79■■□□□ 1.56
SSBP4-209ENST00000601357 NOLC1Q14978 699 aaKnown RBP eCLIP24.79■■□□□ 1.56
SSBP4-209ENST00000601357 PDXDC1Q6P996 788 aa24.79■■□□□ 1.56
SSBP4-209ENST00000601357 OTOP3Q7RTS5 596 aa24.79■■□□□ 1.56
SSBP4-209ENST00000601357 HAUS6Q7Z4H7 955 aa24.79■■□□□ 1.56
SSBP4-209ENST00000601357 ACSF2Q96CM8 615 aaPredicted RBP24.79■■□□□ 1.56
SSBP4-209ENST00000601357 SLC38A7Q9NVC3 462 aa24.79■■□□□ 1.56
SSBP4-209ENST00000601357 ANKFY1Q9P2R3 1169 aa24.79■■□□□ 1.56
SSBP4-209ENST00000601357 FBXW11Q9UKB1 542 aa24.79■■□□□ 1.56
SSBP4-209ENST00000601357 N4BP1O75113 896 aaKnown RBP24.78■■□□□ 1.56
SSBP4-209ENST00000601357 ASGR2P07307 311 aa24.78■■□□□ 1.56
SSBP4-209ENST00000601357 SCP2P22307 547 aa24.78■■□□□ 1.56
SSBP4-209ENST00000601357 MCM6Q14566 821 aa24.78■■□□□ 1.56
SSBP4-209ENST00000601357 DDX27Q96GQ7 796 aaKnown RBP24.78■■□□□ 1.56
SSBP4-209ENST00000601357 HAPLN2Q9GZV7 340 aa24.78■■□□□ 1.56
SSBP4-209ENST00000601357 FBXO2Q9UK22 296 aaPredicted RBP24.78■■□□□ 1.56
SSBP4-209ENST00000601357 ADAM12O43184 909 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 ZMYND10O75800 440 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 SLC10A6Q3KNW5 377 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 FAM173BQ6P4H8 233 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 USP49Q70CQ1 688 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 FBXL6Q8N531 539 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 SMG7Q92540 1137 aaKnown RBP24.77■■□□□ 1.56
SSBP4-209ENST00000601357 EPSTI1Q96J88 318 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 PRKD2Q9BZL6 878 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 SMOC2Q9H3U7 446 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 MTMR6Q9Y217 621 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 CLUHO75153 1309 aa24.77■■□□□ 1.56
SSBP4-209ENST00000601357 K7ELQ4 463 aaPredicted RBP24.76■■□□□ 1.55
SSBP4-209ENST00000601357 CLDN3O15551 220 aa24.76■■□□□ 1.55
SSBP4-209ENST00000601357 HARSP12081 509 aaKnown RBP24.76■■□□□ 1.55
SSBP4-209ENST00000601357 DHX8Q14562 1220 aaKnown RBP24.76■■□□□ 1.55
SSBP4-209ENST00000601357 SEZ6Q53EL9 994 aa24.76■■□□□ 1.55
SSBP4-209ENST00000601357 LARP4BQ92615 738 aaKnown RBP24.76■■□□□ 1.55
SSBP4-209ENST00000601357 FIZ1Q96SL8 496 aa24.76■■□□□ 1.55
SSBP4-209ENST00000601357 PARVGQ9HBI0 331 aa24.76■■□□□ 1.55
SSBP4-209ENST00000601357 MTRRQ9UBK8 725 aa24.76■■□□□ 1.55
SSBP4-209ENST00000601357 SRPRBQ9Y5M8 271 aaKnown RBP24.76■■□□□ 1.55
SSBP4-209ENST00000601357 MORC2Q9Y6X9 1032 aaPredicted RBP24.76■■□□□ 1.55
SSBP4-209ENST00000601357 MUC6Q6W4X9 2439 aa24.75■■□□□ 1.55
SSBP4-209ENST00000601357 PODXLO00592 558 aa24.75■■□□□ 1.55
SSBP4-209ENST00000601357 TRAPPC3O43617 180 aa24.75■■□□□ 1.55
SSBP4-209ENST00000601357 PIGRP01833 764 aa24.75■■□□□ 1.55
SSBP4-209ENST00000601357 TKTP29401 623 aaKnown RBP24.75■■□□□ 1.55
SSBP4-209ENST00000601357 DDIT3P35638 169 aa24.75■■□□□ 1.55
SSBP4-209ENST00000601357 RAB33AQ14088 237 aa24.75■■□□□ 1.55
SSBP4-209ENST00000601357 MYCT1Q8N699 235 aa24.75■■□□□ 1.55
SSBP4-209ENST00000601357 RASSF8Q8NHQ8 419 aa24.75■■□□□ 1.55
SSBP4-209ENST00000601357 C18orf25Q96B23 403 aaPredicted RBP24.75■■□□□ 1.55
SSBP4-209ENST00000601357 TBX20Q9UMR3 447 aa24.75■■□□□ 1.55
SSBP4-209ENST00000601357 I3L4J1 428 aa24.74■■□□□ 1.55
SSBP4-209ENST00000601357 FAM189A1O60320 539 aa24.74■■□□□ 1.55
SSBP4-209ENST00000601357 FAM13AO94988 1023 aa24.74■■□□□ 1.55
SSBP4-209ENST00000601357 MARCKSP29966 332 aaPredicted RBP24.74■■□□□ 1.55
SSBP4-209ENST00000601357 RPL9P32969 192 aaKnown RBP24.74■■□□□ 1.55
SSBP4-209ENST00000601357 BRCC3P46736 316 aa24.74■■□□□ 1.55
SSBP4-209ENST00000601357 SPECC1Q5M775 1068 aa24.74■■□□□ 1.55
SSBP4-209ENST00000601357 RSPO2Q6UXX9 243 aaPredicted RBP24.74■■□□□ 1.55
SSBP4-209ENST00000601357 STAMQ92783 540 aa24.74■■□□□ 1.55
SSBP4-209ENST00000601357 BACE2Q9Y5Z0 518 aa24.74■■□□□ 1.55
SSBP4-209ENST00000601357 DOCK8Q8NF50 2099 aa24.73■■□□□ 1.55
SSBP4-209ENST00000601357 K7ENM7 598 aa24.73■■□□□ 1.55
SSBP4-209ENST00000601357 TRAK2O60296 914 aa24.73■■□□□ 1.55
SSBP4-209ENST00000601357 OR1D2P34982 312 aa24.73■■□□□ 1.55
SSBP4-209ENST00000601357 ANKS3Q6ZW76 656 aa24.73■■□□□ 1.55
SSBP4-209ENST00000601357 SUGP1Q8IWZ8 645 aaKnown RBP24.73■■□□□ 1.55
SSBP4-209ENST00000601357 PLEKHA5Q9HAU0 1116 aa24.73■■□□□ 1.55
SSBP4-209ENST00000601357 KCNK12Q9HB15 430 aa24.73■■□□□ 1.55
SSBP4-209ENST00000601357 EPS15L1Q9UBC2 864 aa24.73■■□□□ 1.55
SSBP4-209ENST00000601357 MYH15Q9Y2K3 1946 aa24.73■■□□□ 1.55
SSBP4-209ENST00000601357 TTC26A0AVF1 554 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 KRT18P05783 430 aaKnown RBP24.72■■□□□ 1.55
SSBP4-209ENST00000601357 CLTAP09496 248 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 HNRNPA1P09651 372 aaKnown RBP eCLIP24.72■■□□□ 1.55
SSBP4-209ENST00000601357 CXCL8P10145 99 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 HOXA9P31269 272 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 LIG4P49917 911 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 GTF2BQ00403 316 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 BICD1Q96G01 975 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 CLIC6Q96NY7 704 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 MYADMQ96S97 322 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 PIDD1Q9HB75 910 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 STK17AQ9UEE5 414 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 CDY1Q9Y6F8 540 aa24.72■■□□□ 1.55
SSBP4-209ENST00000601357 HNRNPDLO14979 420 aaKnown RBP24.71■■□□□ 1.55
SSBP4-209ENST00000601357 STX6O43752 255 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 PDGFBP01127 241 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms