RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 EFCAB13Q8IY85 973 aa24.38■■□□□ 1.49
IRF3-228ENST00000601291 PAWRQ96IZ0 340 aaKnown RBP24.38■■□□□ 1.49
IRF3-228ENST00000601291 SNX27Q96L92 541 aa24.38■■□□□ 1.49
IRF3-228ENST00000601291 BAG1Q99933 345 aaPredicted RBP24.38■■□□□ 1.49
IRF3-228ENST00000601291 APOL6Q9BWW8 343 aa24.38■■□□□ 1.49
IRF3-228ENST00000601291 NAA15Q9BXJ9 866 aaKnown RBP24.38■■□□□ 1.49
IRF3-228ENST00000601291 OSBPL7Q9BZF2 842 aa24.38■■□□□ 1.49
IRF3-228ENST00000601291 ZNHIT6Q9NWK9 470 aaKnown RBP24.38■■□□□ 1.49
IRF3-228ENST00000601291 C2CD2Q9Y426 696 aa24.38■■□□□ 1.49
IRF3-228ENST00000601291 HES2Q9Y543 173 aa24.38■■□□□ 1.49
IRF3-228ENST00000601291 PCDHB2Q9Y5E7 798 aa24.38■■□□□ 1.49
IRF3-228ENST00000601291 RECQL4O94761 1208 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 TLE2Q04725 743 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 TMEM132DQ14C87 1099 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 RRAGAQ7L523 313 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 NECAB2Q7Z6G3 386 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 SMG8Q8ND04 991 aaKnown RBP24.37■■□□□ 1.49
IRF3-228ENST00000601291 BAP1Q92560 729 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 SEMA4DQ92854 862 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 SPAG5Q96R06 1193 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 TRAIPQ9BWF2 469 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 IFIH1Q9BYX4 1025 aaKnown RBP24.37■■□□□ 1.49
IRF3-228ENST00000601291 PARP2Q9UGN5 583 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 ATP11BQ9Y2G3 1177 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 DERAQ9Y315 318 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 FHOD1Q9Y613 1164 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 MEFVO15553 781 aaPredicted RBP24.37■■□□□ 1.49
IRF3-228ENST00000601291 HLA-DRAP01903 254 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 NFICP08651 508 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 SKILP12757 684 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 FAAP100Q0VG06 881 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 MBTPS1Q14703 1052 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 WDR44Q5JSH3 913 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 PDXDC1Q6P996 788 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 TRAPPC11Q7Z392 1133 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 FAM84AQ96KN4 292 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 NT5C1BQ96P26 610 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 IMPG2Q9BZV3 1241 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 HIPK3Q9H422 1215 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 MYO6Q9UM54 1294 aa24.37■■□□□ 1.49
IRF3-228ENST00000601291 LRRC53A6NM62 1247 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 SKIP12755 728 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 AKAP5P24588 427 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 CCZ1BP86790 482 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 CCZ1P86791 482 aaPredicted RBP24.36■■□□□ 1.49
IRF3-228ENST00000601291 RAPGEF1Q13905 1077 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 DSC3Q14574 896 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 RALGAPA2Q2PPJ7 1873 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 IQCEQ6IPM2 695 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 FAM43BQ6ZT52 329 aaPredicted RBP24.36■■□□□ 1.49
IRF3-228ENST00000601291 KIF12Q96FN5 646 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 TSPAN18Q96SJ8 248 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 TMX1Q9H3N1 280 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 C1orf112Q9NSG2 853 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 CNTN3Q9P232 1028 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 DNAJC12Q9UKB3 198 aa24.36■■□□□ 1.49
IRF3-228ENST00000601291 PARNO95453 639 aaKnown RBP24.35■■□□□ 1.49
IRF3-228ENST00000601291 VNN1O95497 513 aa24.35■■□□□ 1.49
IRF3-228ENST00000601291 TRPC3Q13507 836 aa24.35■■□□□ 1.49
IRF3-228ENST00000601291 NCOA4Q13772 614 aa24.35■■□□□ 1.49
IRF3-228ENST00000601291 PHLDB3Q6NSJ2 640 aa24.35■■□□□ 1.49
IRF3-228ENST00000601291 FAM81BQ96LP2 452 aa24.35■■□□□ 1.49
IRF3-228ENST00000601291 ADAM2Q99965 735 aa24.35■■□□□ 1.49
IRF3-228ENST00000601291 ZKSCAN5Q9Y2L8 839 aa24.35■■□□□ 1.49
IRF3-228ENST00000601291 ANK1P16157 1881 aa24.35■■□□□ 1.49
IRF3-228ENST00000601291 BRCA2P51587 3418 aa24.34■■□□□ 1.49
IRF3-228ENST00000601291 CLSTN1O94985 981 aa24.34■■□□□ 1.49
IRF3-228ENST00000601291 ITGA4P13612 1032 aa24.34■■□□□ 1.49
IRF3-228ENST00000601291 GJB7Q6PEY0 223 aa24.34■■□□□ 1.49
IRF3-228ENST00000601291 FMNL3Q8IVF7 1028 aa24.34■■□□□ 1.49
IRF3-228ENST00000601291 SYN2Q92777 582 aaPredicted RBP24.34■■□□□ 1.49
IRF3-228ENST00000601291 FTHL17Q9BXU8 183 aa24.34■■□□□ 1.49
IRF3-228ENST00000601291 PLAGL2Q9UPG8 496 aa24.34■■□□□ 1.49
IRF3-228ENST00000601291 MGEA5O60502 916 aa24.33■■□□□ 1.49
IRF3-228ENST00000601291 FECHP22830 423 aa24.33■■□□□ 1.49
IRF3-228ENST00000601291 SFMBT2Q5VUG0 894 aa24.33■■□□□ 1.49
IRF3-228ENST00000601291 ALKAL1Q6UXT8 129 aa24.33■■□□□ 1.49
IRF3-228ENST00000601291 PPM1KQ8N3J5 372 aa24.33■■□□□ 1.49
IRF3-228ENST00000601291 STK33Q9BYT3 514 aa24.33■■□□□ 1.49
IRF3-228ENST00000601291 UBE2TQ9NPD8 197 aaPredicted RBP24.33■■□□□ 1.49
IRF3-228ENST00000601291 R3HCC1Q9Y3T6 440 aaKnown RBP24.33■■□□□ 1.49
IRF3-228ENST00000601291 A0A0U1RQF3 1178 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 XPOTO43592 962 aaKnown RBP24.33■■□□□ 1.48
IRF3-228ENST00000601291 ZNF623O75123 536 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 LRRN2O75325 713 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 CLTBP09497 229 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 HNRNPH3P31942 346 aaKnown RBP24.33■■□□□ 1.48
IRF3-228ENST00000601291 MFAP3P55082 362 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 CYP26C1Q6V0L0 522 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 TMTC1Q8IUR5 882 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 TMEM139Q8IV31 216 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 ARHGEF19Q8IW93 802 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 PI4K2AQ9BTU6 479 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 RNF39Q9H2S5 420 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 ITGA11Q9UKX5 1188 aa24.33■■□□□ 1.48
IRF3-228ENST00000601291 ARHGAP6O43182 974 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 KRT19P08727 400 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 JAM2P57087 298 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 MEA1Q16626 185 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 SGSM1Q2NKQ1 1148 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms