RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 ZNF558Q96NG5 402 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 TGS1Q96RS0 853 aaKnown RBP18.11■□□□□ 0.49
USHBP1-210ENST00000600286 TMEM175Q9BSA9 504 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 ANP32EQ9BTT0 268 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 MKNK1Q9BUB5 465 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 NKX2-4Q9H2Z4 354 aa18.11■□□□□ 0.49
USHBP1-210ENST00000600286 METTL14Q9HCE5 456 aaKnown RBP18.11■□□□□ 0.49
USHBP1-210ENST00000600286 UBQLN1Q9UMX0 589 aaKnown RBP18.11■□□□□ 0.49
USHBP1-210ENST00000600286 PTPRSQ13332 1948 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 SLC16A3O15427 465 aaKnown RBP18.1■□□□□ 0.49
USHBP1-210ENST00000600286 ZC3H11AO75152 810 aaKnown RBP eCLIP18.1■□□□□ 0.49
USHBP1-210ENST00000600286 ADRB2P07550 413 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 TNNI1P19237 187 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 CYP24A1Q07973 514 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 TUSC3Q13454 348 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 DUOXA2Q1HG44 320 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 FILIP1Q7Z7B0 1213 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 DDX27Q96GQ7 796 aaKnown RBP18.1■□□□□ 0.49
USHBP1-210ENST00000600286 ANKRD36BP1Q96IX9 119 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 COLEC11Q9BWP8 271 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 SRRTQ9BXP5 876 aaKnown RBP18.1■□□□□ 0.49
USHBP1-210ENST00000600286 RC3H2Q9HBD1 1191 aaKnown RBP18.1■□□□□ 0.49
USHBP1-210ENST00000600286 MIOSQ9NXC5 875 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 FAN1Q9Y2M0 1017 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 C2CD2Q9Y426 696 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 MRPL42Q9Y6G3 142 aaKnown RBP18.1■□□□□ 0.49
USHBP1-210ENST00000600286 MUC3AQ02505 3323 aa18.1■□□□□ 0.49
USHBP1-210ENST00000600286 LINC01553A4QN01 128 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 TRIM49BA6NDI0 452 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 STX10O60499 249 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 CAVIN2O95810 425 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 TNNC2P02585 160 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 RB1P06400 928 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 TMEM191BP0C7N4 346 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 DLATP10515 647 aaKnown RBP18.09■□□□□ 0.49
USHBP1-210ENST00000600286 MYOGP15173 224 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 CYP3A5P20815 502 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 RPL9P32969 192 aaKnown RBP18.09■□□□□ 0.49
USHBP1-210ENST00000600286 PPM1AP35813 382 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 PBX2P40425 430 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 OR1G1P47890 313 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 AP3M2P53677 418 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 TFAMQ00059 246 aaKnown RBP18.09■□□□□ 0.49
USHBP1-210ENST00000600286 KRT17Q04695 432 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 PSMD6Q15008 389 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 ZSCAN23Q3MJ62 389 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 CCDC40Q4G0X9 1142 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 GLRA4Q5JXX5 417 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 JADE1Q6IE81 842 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 TTI2Q6NXR4 508 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 FAM114A1Q8IWE2 563 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 CCDC127Q96BQ5 260 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 MFSD14AQ96MC6 490 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 PPP1R10Q96QC0 940 aaKnown RBP18.09■□□□□ 0.49
USHBP1-210ENST00000600286 PLVAPQ9BX97 442 aa18.09■□□□□ 0.49
USHBP1-210ENST00000600286 MAGEC2Q9UBF1 373 aaPredicted RBP18.09■□□□□ 0.49
USHBP1-210ENST00000600286 LCHNA4D1U4 455 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 SMTNL1A8MU46 457 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 PTGESO14684 152 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 CTNNB1P35222 781 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 BMPR1AP36894 532 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 CASP4P49662 377 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 PMS1P54277 932 aaKnown RBP18.08■□□□□ 0.48
USHBP1-210ENST00000600286 BCAR1P56945 870 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 ENPEPQ07075 957 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 KCNT2Q6UVM3 1135 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 LRRC55Q6ZSA7 311 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 ZNF280BQ86YH2 543 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 CREBRFQ8IUR6 639 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 GSTCDQ8NEC7 633 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 ZSWIM2Q8NEG5 633 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 TMC2Q8TDI7 906 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 CLP1Q92989 425 aaKnown RBP18.08■□□□□ 0.48
USHBP1-210ENST00000600286 CWH43Q9H720 699 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 NRDE2Q9H7Z3 1164 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 PDE11AQ9HCR9 933 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 STK39Q9UEW8 545 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 ARMCX3Q9UH62 379 aaPredicted RBP18.08■□□□□ 0.48
USHBP1-210ENST00000600286 PUF60Q9UHX1 559 aaKnown RBP18.08■□□□□ 0.48
USHBP1-210ENST00000600286 YBX2Q9Y2T7 364 aaKnown RBP18.08■□□□□ 0.48
USHBP1-210ENST00000600286 MYO9BQ13459 2157 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 TRANK1O15050 2925 aa18.08■□□□□ 0.48
USHBP1-210ENST00000600286 AKAP3O75969 853 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 VAMP7P51809 220 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 AFF1P51825 1210 aaKnown RBP18.07■□□□□ 0.48
USHBP1-210ENST00000600286 SPAG1Q07617 926 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 BMS1Q14692 1282 aaKnown RBP18.07■□□□□ 0.48
USHBP1-210ENST00000600286 ANO6Q4KMQ2 910 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 SPATA1Q5VX52 437 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 FRMD5Q7Z6J6 570 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 WDR49Q8IV35 697 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 COLGALT2Q8IYK4 626 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 COLGALT1Q8NBJ5 622 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 ENOX1Q8TC92 643 aaKnown RBP18.07■□□□□ 0.48
USHBP1-210ENST00000600286 ZMAT2Q96NC0 199 aaKnown RBP18.07■□□□□ 0.48
USHBP1-210ENST00000600286 DUSP9Q99956 384 aaKnown RBP18.07■□□□□ 0.48
USHBP1-210ENST00000600286 GZF1Q9H116 711 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-210ENST00000600286 DNAJC25Q9H1X3 360 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 SPG21Q9NZD8 308 aa18.07■□□□□ 0.48
USHBP1-210ENST00000600286 BECN2A8MW95 431 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms