RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 RNASELQ05823 741 aaKnown RBP14.95□□□□□ -0.02
VRK3-219ENST00000600137 SPAG1Q07617 926 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 SCARA3Q6AZY7 606 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 BRSK2Q8IWQ3 736 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 RNF168Q8IYW5 571 aaPredicted RBP14.95□□□□□ -0.02
VRK3-219ENST00000600137 GPD1LQ8N335 351 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 RABGGTAQ92696 567 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 IGSF21Q96ID5 467 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 ZNF558Q96NG5 402 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 MED15Q96RN5 788 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 RPS6KC1Q96S38 1066 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 ASB7Q9H672 318 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 GOLGA2P5Q9HBQ8 144 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 PCDHB12Q9Y5F1 795 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 ALDH7A1P49419 539 aaKnown RBP14.94□□□□□ -0.02
VRK3-219ENST00000600137 CASP4P49662 377 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 MYBPC2Q14324 1141 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 SPOUT1Q5T280 376 aaKnown RBP14.94□□□□□ -0.02
VRK3-219ENST00000600137 JADE1Q6IE81 842 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 HS2ST1Q7LGA3 356 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 CD302Q8IX05 232 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 ZC3H3Q8IXZ2 948 aaKnown RBP14.94□□□□□ -0.02
VRK3-219ENST00000600137 EFCAB13Q8IY85 973 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 XXYLT1Q8NBI6 393 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 PLEKHO2Q8TD55 490 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 MYLIPQ8WY64 445 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 MFSD14AQ96MC6 490 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 NUP62CLQ9H1M0 184 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 AAASQ9NRG9 546 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 SPG21Q9NZD8 308 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 FAN1Q9Y2M0 1017 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 MTCH2Q9Y6C9 303 aa14.94□□□□□ -0.02
VRK3-219ENST00000600137 CASTOR2A6NHX0 329 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 KIF20AO95235 890 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 MBD3O95983 291 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 NR3C1P04150 777 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 NFICP08651 508 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 OR1G1P47890 313 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 CYP2J2P51589 502 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 CLCNKBP51801 687 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 ERVFC1P60507 584 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 UPP1Q16831 310 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 SPATA1Q5VX52 437 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 ANKRD40Q6AI12 368 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 TAS1R1Q7RTX1 841 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 TRIML1Q8N9V2 468 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 RDH13Q8NBN7 331 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 C3orf58Q8NDZ4 430 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 CXorf38Q8TB03 319 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 GOLGA5Q8TBA6 731 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 POF1BQ8WVV4 589 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 FAM84AQ96KN4 292 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 FAM193BQ96PV7 902 aaPredicted RBP14.93□□□□□ -0.02
VRK3-219ENST00000600137 TSPAN18Q96SJ8 248 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 C11orf84Q9BUA3 381 aaPredicted RBP14.93□□□□□ -0.02
VRK3-219ENST00000600137 GTPBP4Q9BZE4 634 aaKnown RBP14.93□□□□□ -0.02
VRK3-219ENST00000600137 PDE11AQ9HCR9 933 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 TMEM63CQ9P1W3 806 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 TUBGCP4Q9UGJ1 667 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 LZTS1Q9Y250 596 aa14.93□□□□□ -0.02
VRK3-219ENST00000600137 PRG3Q9Y2Y8 225 aaPredicted RBP14.93□□□□□ -0.02
VRK3-219ENST00000600137 PTPRJQ12913 1337 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 EYSQ5T1H1 3165 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 ZNF233A6NK53 670 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 CYP3A5P20815 502 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 CCNE1P24864 410 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 LRPAP1P30533 357 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 IRS1P35568 1242 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 GUCY2FP51841 1108 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 PPP2R3AQ06190 1150 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 SNRNP35Q16560 246 aaKnown RBP14.92□□□□□ -0.02
VRK3-219ENST00000600137 FAM212AQ96EL1 285 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 KIF12Q96FN5 646 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 BORCS6Q96GS4 357 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 DHTKD1Q96HY7 919 aaPredicted RBP14.92□□□□□ -0.02
VRK3-219ENST00000600137 DUSP9Q99956 384 aaKnown RBP14.92□□□□□ -0.02
VRK3-219ENST00000600137 GPR62Q9BZJ7 368 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 KIAA1586Q9HCI6 787 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 RBAKQ9NYW8 714 aaPredicted RBP14.92□□□□□ -0.02
VRK3-219ENST00000600137 LMCD1Q9NZU5 365 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 DERAQ9Y315 318 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 C2CD2Q9Y426 696 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 SCN1AP35498 2009 aa14.92□□□□□ -0.02
VRK3-219ENST00000600137 COL6A3P12111 3177 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 ANO9A1A5B4 782 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 TRIM49BA6NDI0 452 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 TMEM189-UBE2V1I3L0A0 370 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 PPEF2O14830 753 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 FSCN2O14926 492 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 CALUO43852 315 aaPredicted RBP14.91□□□□□ -0.02
VRK3-219ENST00000600137 LILRB3O75022 631 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 AKAP3O75969 853 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 KIF4AO95239 1232 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 IL18RAPO95256 599 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 PPM1AP35813 382 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 UBE3AQ05086 875 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 CYP24A1Q07973 514 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 HSP90AA2PQ14568 343 aaPredicted RBP14.91□□□□□ -0.02
VRK3-219ENST00000600137 EDRF1Q3B7T1 1238 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 C1orf220Q5T0J3 134 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms