RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 TINF2Q9BSI4 451 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 C2orf40Q9H1Z8 148 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 FTLP02792 175 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 MMEP08473 750 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 IQCF3P0C7M6 154 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 CYP11B1P15538 503 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 PIK3CAP42336 1068 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 FMO1Q01740 532 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 ZNF484Q5JVG2 852 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 SPATA4Q8NEY3 305 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 ISCUQ9H1K1 167 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 FZD8Q9H461 694 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 C1orf112Q9NSG2 853 aa18.34■□□□□ 0.53
SHKBP1-216ENST00000598201 EVPLQ92817 2033 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 CCDC151A5D8V7 595 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 ANKRD62A6NC57 917 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 SLC15A5A6NIM6 579 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 INO80B-WBP1J3KQ70 363 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 PTENP60484 403 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 MCL1Q07820 350 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 ACVR2BQ13705 512 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 BRD3Q15059 726 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 MORN1Q5T089 497 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 CDR2LQ86X02 465 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 BRSK2Q8IWQ3 736 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 DDX1Q92499 740 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 INO80BQ9C086 356 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 APOBEC3GQ9HC16 384 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 GJD2Q9UKL4 321 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 ZHX1Q9UKY1 873 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 COG5Q9UP83 839 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 MGAMO43451 1857 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 ZSWIM8A7E2V4 1837 aa18.33■□□□□ 0.52
SHKBP1-216ENST00000598201 ACKR2O00590 384 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 KIF4AO95239 1232 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 GNRH1P01148 92 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 PROZP22891 400 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 HOXD10P28358 340 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 MBTD1Q05BQ5 628 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 TFDP1Q14186 410 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 RPS6KA1Q15418 735 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 DUSP28Q4G0W2 176 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 CCDC181Q5TID7 509 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 LINC01465Q8N7H1 131 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 PPP1R16BQ96T49 567 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 PTPRHQ9HD43 1115 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 STXBP5LQ9Y2K9 1186 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 DOCK3Q8IZD9 2030 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 OGTO15294 1046 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 BUB1BO60566 1050 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 PPFIA4O75335 1185 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 CSDE1O75534 798 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 KRT5P13647 590 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 ITIH3Q06033 890 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 WDR44Q5JSH3 913 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 EEF1DP3Q658K8 133 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 TSHZ1Q6ZSZ6 1077 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 ENOSF1Q7L5Y1 443 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 DAAM2Q86T65 1068 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 ABHD16BQ9H3Z7 469 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 IFT122Q9HBG6 1241 aa18.32■□□□□ 0.52
SHKBP1-216ENST00000598201 CASP8AP2Q9UKL3 1982 aa18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 CDR2Q01850 454 aa18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 ATF7IP2Q5U623 682 aa18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 NT5DC3Q86UY8 548 aa18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 MMGT1Q8N4V1 131 aa18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 SOCS4Q8WXH5 440 aa18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 ARFGAP3Q9NP61 516 aa18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 FAM53CQ9NYF3 392 aa18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 CPSF3Q9UKF6 684 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 GABRQQ9UN88 632 aa18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 UMODL1Q5DID0 1318 aa18.31■□□□□ 0.52
SHKBP1-216ENST00000598201 H3BRB1 525 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 KCNK3O14649 394 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 ASAP2O43150 1006 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 RTN2O75298 545 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 MMP3P08254 477 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 PAFAH1B1P43034 410 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 FLT3LGP49771 235 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 PDE6CP51160 858 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 PRKCZQ05513 592 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 MAP2K5Q13163 448 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 CFAP221Q4G0U5 840 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 PRAMEF19Q5SWL8 479 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 MPZL3Q6UWV2 235 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 PEX26Q7Z412 305 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 LMBR1Q8WVP7 490 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 USP6NLQ92738 828 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 TUT1Q9H6E5 874 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 RBM12Q9NTZ6 932 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 SRRDQ9UH36 339 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 CHORDC1Q9UHD1 332 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 TRIM17Q9Y577 477 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 SASH3O75995 380 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 GZMAP12544 262 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 ACO1P21399 889 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 RNASE9P60153 205 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 LONRF2Q1L5Z9 754 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 WDR93Q6P2C0 686 aa18.3■□□□□ 0.52
SHKBP1-216ENST00000598201 THNSL1Q8IYQ7 743 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms