RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 NRP1O14786 923 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 OR1G1P47890 313 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 GPM6BQ13491 265 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 MYBPC2Q14324 1141 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 SLC39A11Q8N1S5 342 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 RDH13Q8NBN7 331 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 DHTKD1Q96HY7 919 aaPredicted RBP20.98■□□□□ 0.95
PNKP-207ENST00000596014 TSPAN18Q96SJ8 248 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 PAAF1Q9BRP4 392 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 SLC38A7Q9NVC3 462 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 SPG21Q9NZD8 308 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 CACNG4Q9UBN1 327 aa20.98■□□□□ 0.95
PNKP-207ENST00000596014 CARNS1A5YM72 827 aa20.97■□□□□ 0.95
PNKP-207ENST00000596014 EXOC3O60645 756 aa20.97■□□□□ 0.95
PNKP-207ENST00000596014 FGF18O76093 207 aa20.97■□□□□ 0.95
PNKP-207ENST00000596014 PPM1AP35813 382 aa20.97■□□□□ 0.95
PNKP-207ENST00000596014 PPP1R2P41236 205 aa20.97■□□□□ 0.95
PNKP-207ENST00000596014 SOX4Q06945 474 aaPredicted RBP20.97■□□□□ 0.95
PNKP-207ENST00000596014 ZBTB6Q15916 424 aa20.97■□□□□ 0.95
PNKP-207ENST00000596014 SNRNP35Q16560 246 aaKnown RBP20.97■□□□□ 0.95
PNKP-207ENST00000596014 NFIL3Q16649 462 aa20.97■□□□□ 0.95
PNKP-207ENST00000596014 CAVIN1Q6NZI2 390 aaKnown RBP20.97■□□□□ 0.95
PNKP-207ENST00000596014 RBM43Q6ZSC3 357 aaKnown RBP20.97■□□□□ 0.95
PNKP-207ENST00000596014 TMEM173Q86WV6 379 aaPredicted RBP20.97■□□□□ 0.95
PNKP-207ENST00000596014 C18orf25Q96B23 403 aaPredicted RBP20.97■□□□□ 0.95
PNKP-207ENST00000596014 KIF12Q96FN5 646 aa20.97■□□□□ 0.95
PNKP-207ENST00000596014 ALG13Q9NP73 1137 aaKnown RBP20.97■□□□□ 0.95
PNKP-207ENST00000596014 CASTOR2A6NHX0 329 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 PSMA7O14818 248 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 LPXNO60711 386 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 IL18RAPO95256 599 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 ITGB1P05556 798 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 WNT7BP56706 349 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 MYO7AQ13402 2215 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 CCDC183Q5T5S1 534 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 JADE1Q6IE81 842 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 GDPD5Q8WTR4 605 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 RABGGTAQ92696 567 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 GOLGA2P5Q9HBQ8 144 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 MTMR10Q9NXD2 777 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 PRG3Q9Y2Y8 225 aaPredicted RBP20.96■□□□□ 0.95
PNKP-207ENST00000596014 COL4A4P53420 1690 aaPredicted RBP20.96■□□□□ 0.95
PNKP-207ENST00000596014 GRM6O15303 877 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 NR2F2P24468 414 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 PLCB3Q01970 1234 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 HSP90AA2PQ14568 343 aaPredicted RBP20.96■□□□□ 0.95
PNKP-207ENST00000596014 EDRF1Q3B7T1 1238 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 ANKRD40Q6AI12 368 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 SPPL3Q8TCT6 385 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 IGSF21Q96ID5 467 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 COLEC11Q9BWP8 271 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 TMEM63CQ9P1W3 806 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 UBQLN1Q9UMX0 589 aaKnown RBP20.96■□□□□ 0.95
PNKP-207ENST00000596014 DERAQ9Y315 318 aa20.96■□□□□ 0.95
PNKP-207ENST00000596014 NFICP08651 508 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 CCNE1P24864 410 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 RPL13P26373 211 aaKnown RBP20.95■□□□□ 0.94
PNKP-207ENST00000596014 CASP4P49662 377 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 PMS1P54277 932 aaKnown RBP20.95■□□□□ 0.94
PNKP-207ENST00000596014 ADAM9Q13443 819 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 KLHL10Q6JEL2 608 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 BCL7CQ8WUZ0 217 aaPredicted RBP20.95■□□□□ 0.94
PNKP-207ENST00000596014 TMEM169Q96HH4 297 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 GUCD1Q96NT3 240 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 CDX2Q99626 313 aaPredicted RBP20.95■□□□□ 0.94
PNKP-207ENST00000596014 TSG101Q99816 390 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 PDE11AQ9HCR9 933 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 MARCH5Q9NX47 278 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 TUBGCP4Q9UGJ1 667 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 C2CD2Q9Y426 696 aa20.95■□□□□ 0.94
PNKP-207ENST00000596014 TRIM49BA6NDI0 452 aa20.94■□□□□ 0.94
PNKP-207ENST00000596014 F8W810 466 aa20.94■□□□□ 0.94
PNKP-207ENST00000596014 TULP1O00294 542 aaPredicted RBP20.94■□□□□ 0.94
PNKP-207ENST00000596014 CLCNKBP51801 687 aa20.94■□□□□ 0.94
PNKP-207ENST00000596014 KRT17Q04695 432 aa20.94■□□□□ 0.94
PNKP-207ENST00000596014 LRRC63Q05C16 580 aa20.94■□□□□ 0.94
PNKP-207ENST00000596014 TMEM132DQ14C87 1099 aa20.94■□□□□ 0.94
PNKP-207ENST00000596014 UPP1Q16831 310 aa20.94■□□□□ 0.94
PNKP-207ENST00000596014 EFCAB13Q8IY85 973 aa20.94■□□□□ 0.94
PNKP-207ENST00000596014 MFSD14AQ96MC6 490 aa20.94■□□□□ 0.94
PNKP-207ENST00000596014 UROC1Q96N76 676 aa20.94■□□□□ 0.94
PNKP-207ENST00000596014 PRRC2BQ5JSZ5 2229 aaKnown RBP20.94■□□□□ 0.94
PNKP-207ENST00000596014 XPOTO43592 962 aaKnown RBP20.93■□□□□ 0.94
PNKP-207ENST00000596014 CYP3A5P20815 502 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 DNAJB1P25685 340 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 ZNF445P59923 1031 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 CYP24A1Q07973 514 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 ADGRE1Q14246 886 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 SURF1Q15526 300 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 SPATA1Q5VX52 437 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 CEP135Q66GS9 1140 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 NT5DC4Q86YG4 428 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 MLKLQ8NB16 471 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 POF1BQ8WVV4 589 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 NELFBQ8WX92 580 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 DDX27Q96GQ7 796 aaKnown RBP20.93■□□□□ 0.94
PNKP-207ENST00000596014 FRMD4BQ9Y2L6 1034 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.93■□□□□ 0.94
PNKP-207ENST00000596014 RPL9P32969 192 aaKnown RBP20.93■□□□□ 0.94
PNKP-207ENST00000596014 NLRP12P59046 1061 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms