RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 MEFVO15553 781 aaPredicted RBP18.66■□□□□ 0.58
CCDC9-202ENST00000595659 PI15O43692 258 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 C1RP00736 705 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 MCF2P10911 925 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 LAMP2P13473 410 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 PLS3P13797 630 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 PROZP22891 400 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 FSHRP23945 695 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 SLC12A3P55017 1021 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 DHX8Q14562 1220 aaKnown RBP18.66■□□□□ 0.58
CCDC9-202ENST00000595659 HYIQ5T013 277 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 AXDND1Q5T1B0 1012 aaPredicted RBP18.66■□□□□ 0.58
CCDC9-202ENST00000595659 CWF19L1Q69YN2 538 aaKnown RBP18.66■□□□□ 0.58
CCDC9-202ENST00000595659 MPZL3Q6UWV2 235 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 TMEM130Q8N3G9 435 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 SLC44A3Q8N4M1 653 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 SLC7A14Q8TBB6 771 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 CDY1Q9Y6F8 540 aa18.66■□□□□ 0.58
CCDC9-202ENST00000595659 TMEM189-UBE2V1I3L0A0 370 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 STK25O00506 426 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 GALR2O43603 387 aaPredicted RBP18.65■□□□□ 0.58
CCDC9-202ENST00000595659 PAPLNO95428 1278 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 NPR3P17342 541 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 STRN3Q13033 797 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 RAB33AQ14088 237 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 XKR4Q5GH76 650 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 TMEM161BQ8NDZ6 487 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 DDX27Q96GQ7 796 aaKnown RBP18.65■□□□□ 0.58
CCDC9-202ENST00000595659 SNX27Q96L92 541 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 UROC1Q96N76 676 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 NTPCRQ9BSD7 190 aaKnown RBP18.65■□□□□ 0.58
CCDC9-202ENST00000595659 TIPINQ9BVW5 301 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 C17orf75Q9HAS0 396 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.65■□□□□ 0.58
CCDC9-202ENST00000595659 MTRRQ9UBK8 725 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 CA14Q9ULX7 337 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 PLXNA3P51805 1871 aa18.65■□□□□ 0.58
CCDC9-202ENST00000595659 PODXLO00592 558 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 TRAPPC3O43617 180 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 MAPTP10636 758 aaKnown RBP18.64■□□□□ 0.57
CCDC9-202ENST00000595659 CLCN5P51795 746 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 SMTNP53814 917 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 ARPP19P56211 112 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 SPAG1Q07617 926 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 TMEM119Q4V9L6 283 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 ARSHQ5FYA8 562 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 PDXDC1Q6P996 788 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 LRRC15Q8TF66 581 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 SPIRE2Q8WWL2 714 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 RPP25Q9BUL9 199 aaKnown RBP18.64■□□□□ 0.57
CCDC9-202ENST00000595659 HCFC1R1Q9NWW0 138 aa18.64■□□□□ 0.57
CCDC9-202ENST00000595659 TDRD15B5MCY1 1934 aaKnown RBP18.64■□□□□ 0.57
CCDC9-202ENST00000595659 KRBA1A5PL33 1030 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 TOM1L1O75674 476 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 HNRNPA1P09651 372 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC9-202ENST00000595659 KCNE1P15382 129 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 MATR3P43243 847 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC9-202ENST00000595659 MCM2P49736 904 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 GRIN1Q05586 938 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 SLC10A6Q3KNW5 377 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 ARL6IP4Q66PJ3 421 aaKnown RBP18.63■□□□□ 0.57
CCDC9-202ENST00000595659 ITFG1Q8TB96 612 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 TBC1D32Q96NH3 1257 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 HAPLN2Q9GZV7 340 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 SLC38A7Q9NVC3 462 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.63■□□□□ 0.57
CCDC9-202ENST00000595659 NUMBLQ9Y6R0 609 aa18.63■□□□□ 0.57
CCDC9-202ENST00000595659 UBA7P41226 1012 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 HTR4Q13639 388 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 NOLC1Q14978 699 aaKnown RBP eCLIP18.62■□□□□ 0.57
CCDC9-202ENST00000595659 VARS2Q5ST30 1063 aaKnown RBP18.62■□□□□ 0.57
CCDC9-202ENST00000595659 PARM1Q6UWI2 310 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 ANKS3Q6ZW76 656 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 GPBP1Q86WP2 473 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 GPR152Q8TDT2 470 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 BICD1Q96G01 975 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 CNTN3Q9P232 1028 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 TUBGCP4Q9UGJ1 667 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 NUB1Q9Y5A7 615 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 BACE2Q9Y5Z0 518 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 ZDBF2Q9HCK1 2354 aa18.62■□□□□ 0.57
CCDC9-202ENST00000595659 MYO10Q9HD67 2058 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 DENND4AQ7Z401 1863 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 KMT2EQ8IZD2 1858 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 ANHXE9PGG2 379 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 CLDN3O15551 220 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 XYLBO75191 536 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 SRFP11831 508 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 AOC1P19801 751 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 KARSQ15046 597 aaKnown RBP18.61■□□□□ 0.57
CCDC9-202ENST00000595659 ING5Q8WYH8 240 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 FGF13Q92913 245 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 FGF14Q92915 247 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 CALML4Q96GE6 196 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 REEP2Q9BRK0 252 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 IRF2BPLQ9H1B7 796 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 ZHX3Q9H4I2 956 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 DNMT3BQ9UBC3 853 aaKnown RBP18.61■□□□□ 0.57
CCDC9-202ENST00000595659 WNT16Q9UBV4 365 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 CDH7Q9ULB5 785 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms