RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 PLEKHA4Q9H4M7 779 aa19.37■□□□□ 0.69
SHKBP1-204ENST00000594862 XPOTO43592 962 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-204ENST00000594862 B3GAT3O94766 335 aa19.36■□□□□ 0.69
SHKBP1-204ENST00000594862 UPP1Q16831 310 aa19.36■□□□□ 0.69
SHKBP1-204ENST00000594862 RARS2Q5T160 578 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-204ENST00000594862 FAM171A1Q5VUB5 890 aa19.36■□□□□ 0.69
SHKBP1-204ENST00000594862 SLFN12LQ6IEE8 588 aa19.36■□□□□ 0.69
SHKBP1-204ENST00000594862 TAS1R1Q7RTX1 841 aa19.36■□□□□ 0.69
SHKBP1-204ENST00000594862 PAAF1Q9BRP4 392 aa19.36■□□□□ 0.69
SHKBP1-204ENST00000594862 RHOBTB2Q9BYZ6 727 aa19.36■□□□□ 0.69
SHKBP1-204ENST00000594862 EXOC7Q9UPT5 735 aa19.36■□□□□ 0.69
SHKBP1-204ENST00000594862 PDCD11Q14690 1871 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 OGTO15294 1046 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 CLCNKBP51801 687 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 PPP2R3AQ06190 1150 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 PSMD5Q16401 504 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 DYMQ7RTS9 669 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 CD302Q8IX05 232 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 HASPINQ8TF76 798 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 ZBTB45Q96K62 511 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 FIZ1Q96SL8 496 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 PYM1Q9BRP8 204 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 APOL5Q9BWW9 433 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 TNMDQ9H2S6 317 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 MAGEF1Q9HAY2 307 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 C11orf16Q9NQ32 467 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 MAN1C1Q9NR34 630 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 OLFML3Q9NRN5 406 aa19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 TFIP11Q9UBB9 837 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 ARIH1Q9Y4X5 557 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-204ENST00000594862 MUC6Q6W4X9 2439 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 TRIP11Q15643 1979 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 AMPD3Q01432 767 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 POU5F1Q01860 360 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 HERC4Q5GLZ8 1057 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 TMEM31Q5JXX7 168 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 RTP2Q5QGT7 225 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 GPR149Q86SP6 731 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 SFR1Q86XK3 245 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 RNF135Q8IUD6 432 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 IQUBQ8NA54 791 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 RABGGTAQ92696 567 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 RPGRIP1Q96KN7 1286 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 MSTO1Q9BUK6 570 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 CXCL16Q9H2A7 254 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 MRPL44Q9H9J2 332 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 CACNG4Q9UBN1 327 aa19.34■□□□□ 0.69
SHKBP1-204ENST00000594862 C5orf42Q9H799 3197 aa19.33■□□□□ 0.69
SHKBP1-204ENST00000594862 A0A0B4J269 797 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 MYMKA6NI61 221 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 PODXLO00592 558 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 GPR37L1O60883 481 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 FGFR3P22607 806 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 NMT1P30419 496 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 HOXD11P31277 338 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 POSTNQ15063 836 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 SLC10A6Q3KNW5 377 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 ANKS3Q6ZW76 656 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 STXBP4Q6ZWJ1 553 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 ZNF720Q7Z2F6 126 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 CEP57Q86XR8 500 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 CCDC65Q8IXS2 484 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 DNAJC19Q96DA6 116 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 B3GALT6Q96L58 329 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 RPF1Q9H9Y2 349 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 ZDHHC7Q9NXF8 308 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 FAM13BQ9NYF5 915 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 UBQLN1Q9UMX0 589 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 USTQ9Y2C2 406 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 NUB1Q9Y5A7 615 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 PCDHB13Q9Y5F0 798 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 PLXNA3P51805 1871 aa19.33■□□□□ 0.68
SHKBP1-204ENST00000594862 TTC26A0AVF1 554 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 FRMD3A2A2Y4 597 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 SYN3O14994 580 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 CXCL8P10145 99 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 IDEP14735 1019 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 CYP3A5P20815 502 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 PAX3P23760 479 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 ME1P48163 572 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 FOXD4L5Q5VV16 416 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 TMC5Q6UXY8 1006 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 CCDC149Q6ZUS6 474 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 PDILTQ8N807 584 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 C12orf76Q8N812 135 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 FOXD4L4Q8WXT5 416 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 ZMAT2Q96NC0 199 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 POMKQ9H5K3 350 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 ATP6V1DQ9Y5K8 247 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 BACE2Q9Y5Z0 518 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 DENND4AQ7Z401 1863 aa19.32■□□□□ 0.68
SHKBP1-204ENST00000594862 TGM5O43548 720 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 PPP1R37O75864 691 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 PAPLNO95428 1278 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 SOX4Q06945 474 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 BECN1Q14457 450 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 LIN9Q5TKA1 542 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 PRSS55Q6UWB4 352 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 RTL10Q7L3V2 364 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 PLCD3Q8N3E9 789 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms