RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 DNAJB4Q9UDY4 337 aa10.08□□□□□ -0.8
ZNF548-203ENST00000594668 FRMD4BQ9Y2L6 1034 aa10.08□□□□□ -0.8
ZNF548-203ENST00000594668 PCDHA11Q9Y5I1 949 aa10.08□□□□□ -0.8
ZNF548-203ENST00000594668 MRPL42Q9Y6G3 142 aaKnown RBP10.08□□□□□ -0.8
ZNF548-203ENST00000594668 PTPRJQ12913 1337 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 LINC01553A4QN01 128 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 MAPK13O15264 365 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 IL18RAPO95256 599 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 CA3P07451 260 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 IGFBP6P24592 240 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-203ENST00000594668 GUCY2FP51841 1108 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 MCCD1P59942 119 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-203ENST00000594668 SMAD3P84022 425 aaKnown RBP10.07□□□□□ -0.8
ZNF548-203ENST00000594668 RNASELQ05823 741 aaKnown RBP10.07□□□□□ -0.8
ZNF548-203ENST00000594668 DSC1Q08554 894 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 GRIK3Q13003 919 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 PSMD6Q15008 389 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 LRIT3Q3SXY7 679 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 C1orf220Q5T0J3 134 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 SPATA1Q5VX52 437 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 LMBRD2Q68DH5 695 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-203ENST00000594668 CD302Q8IX05 232 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 COLGALT2Q8IYK4 626 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 FAM186BQ8IYM0 893 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 LRRC43Q8N309 656 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 FIBCD1Q8N539 461 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 PARD3BQ8TEW8 1205 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 ZNF516Q92618 1163 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 RABGGTAQ92696 567 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 KIF12Q96FN5 646 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 CEP63Q96MT8 703 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 FAM193BQ96PV7 902 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-203ENST00000594668 PAAF1Q9BRP4 392 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 MKNK1Q9BUB5 465 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 NKX2-4Q9H2Z4 354 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 GOLGA2P5Q9HBQ8 144 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 SAMSN1Q9NSI8 373 aaKnown RBP10.07□□□□□ -0.8
ZNF548-203ENST00000594668 TUBGCP4Q9UGJ1 667 aa10.07□□□□□ -0.8
ZNF548-203ENST00000594668 CASTOR2A6NHX0 329 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 SOX1O00570 391 aaPredicted RBP10.06□□□□□ -0.8
ZNF548-203ENST00000594668 GALTP07902 379 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 DLATP10515 647 aaKnown RBP10.06□□□□□ -0.8
ZNF548-203ENST00000594668 EPB41P11171 864 aaKnown RBP10.06□□□□□ -0.8
ZNF548-203ENST00000594668 PBX3P40426 434 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 VAMP7P51809 220 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 BCAR1P56945 870 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 CLDN10P78369 228 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 TAP1Q03518 808 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 TUSC3Q13454 348 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 TMEM132DQ14C87 1099 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 NCAPHQ15003 741 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 RAB30Q15771 203 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 HSP90AA4PQ58FG1 418 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 SPOUT1Q5T280 376 aaKnown RBP10.06□□□□□ -0.8
ZNF548-203ENST00000594668 LRSAM1Q6UWE0 723 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 FRMD5Q7Z6J6 570 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 DHX40Q8IX18 779 aaKnown RBP10.06□□□□□ -0.8
ZNF548-203ENST00000594668 OR5B17Q8NGF7 314 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 CLP1Q92989 425 aaKnown RBP10.06□□□□□ -0.8
ZNF548-203ENST00000594668 TSPAN18Q96SJ8 248 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 MRPL9Q9BYD2 267 aaKnown RBP10.06□□□□□ -0.8
ZNF548-203ENST00000594668 HSD3B7Q9H2F3 369 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 INTS13Q9NVM9 706 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 MSRAQ9UJ68 235 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 DERAQ9Y315 318 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 C2CD2Q9Y426 696 aa10.06□□□□□ -0.8
ZNF548-203ENST00000594668 LRRIQ3A6PVS8 624 aaPredicted RBP10.05□□□□□ -0.8
ZNF548-203ENST00000594668 NT5C1B-RDH14C9J2C7 533 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 F8W810 466 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 NRP1O14786 923 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 SLC16A3O15427 465 aaKnown RBP10.05□□□□□ -0.8
ZNF548-203ENST00000594668 ZC3H11AO75152 810 aaKnown RBP eCLIP10.05□□□□□ -0.8
ZNF548-203ENST00000594668 FGFR1OPO95684 399 aaKnown RBP10.05□□□□□ -0.8
ZNF548-203ENST00000594668 C4BPAP04003 597 aaKnown RBP10.05□□□□□ -0.8
ZNF548-203ENST00000594668 ALDH2P05091 517 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 TRIM49P0CI25 452 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 TRIM49CP0CI26 452 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 TNNI1P19237 187 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 CYP3A5P20815 502 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 DNAJB2P25686 324 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 SLC11A1P49279 550 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 ZNF165P49910 485 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 CLCNKBP51801 687 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 ZNF445P59923 1031 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 TFAMQ00059 246 aaKnown RBP10.05□□□□□ -0.8
ZNF548-203ENST00000594668 PPP3CAQ08209 521 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 BFSP1Q12934 665 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 HSP90AA2PQ14568 343 aaPredicted RBP10.05□□□□□ -0.8
ZNF548-203ENST00000594668 IQCB1Q15051 598 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 SURF1Q15526 300 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 UPP1Q16831 310 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 TPD52L1Q16890 204 aaPredicted RBP10.05□□□□□ -0.8
ZNF548-203ENST00000594668 KCNT2Q6UVM3 1135 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 CD300LGQ6UXG3 332 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 INTS8Q75QN2 995 aaKnown RBP10.05□□□□□ -0.8
ZNF548-203ENST00000594668 TMEM173Q86WV6 379 aaPredicted RBP10.05□□□□□ -0.8
ZNF548-203ENST00000594668 NT5DC4Q86YG4 428 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 CREBRFQ8IUR6 639 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 WDR49Q8IV35 697 aa10.05□□□□□ -0.8
ZNF548-203ENST00000594668 AOPEPQ8N6M6 819 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms