RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 GLYCTKQ8IVS8 523 aa16.68■□□□□ 0.26
TRIM28-203ENST00000593582 LINC00301Q8NCQ3 95 aa16.68■□□□□ 0.26
TRIM28-203ENST00000593582 HDAC7Q8WUI4 952 aa16.68■□□□□ 0.26
TRIM28-203ENST00000593582 PIK3R5Q8WYR1 880 aa16.68■□□□□ 0.26
TRIM28-203ENST00000593582 ZMAT2Q96NC0 199 aaKnown RBP16.68■□□□□ 0.26
TRIM28-203ENST00000593582 PLEKHA4Q9H4M7 779 aa16.68■□□□□ 0.26
TRIM28-203ENST00000593582 GOLGA2P5Q9HBQ8 144 aa16.68■□□□□ 0.26
TRIM28-203ENST00000593582 PRR33A8MZF0 331 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 SPTLC2O15270 562 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 TGM5O43548 720 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 CLTAP09496 248 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 SPATA31D3P0C874 917 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 RPL17P18621 184 aaKnown RBP16.67■□□□□ 0.26
TRIM28-203ENST00000593582 STAT6P42226 847 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 GTF2BQ00403 316 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 SOX4Q06945 474 aaPredicted RBP16.67■□□□□ 0.26
TRIM28-203ENST00000593582 PSMD5Q16401 504 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 SLC10A6Q3KNW5 377 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 SEZ6Q53EL9 994 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 FOXD4L5Q5VV16 416 aaPredicted RBP16.67■□□□□ 0.26
TRIM28-203ENST00000593582 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.67■□□□□ 0.26
TRIM28-203ENST00000593582 SPATA31D4Q6ZUB0 917 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 DYMQ7RTS9 669 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 CMASQ8NFW8 434 aaPredicted RBP16.67■□□□□ 0.26
TRIM28-203ENST00000593582 LNX1Q8TBB1 728 aaPredicted RBP16.67■□□□□ 0.26
TRIM28-203ENST00000593582 FOXD4L4Q8WXT5 416 aaPredicted RBP16.67■□□□□ 0.26
TRIM28-203ENST00000593582 DDX12PQ92771 950 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 PANK2Q9BZ23 570 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 PLEKHA5Q9HAU0 1116 aa16.67■□□□□ 0.26
TRIM28-203ENST00000593582 TFIP11Q9UBB9 837 aaKnown RBP16.67■□□□□ 0.26
TRIM28-203ENST00000593582 MYH11P35749 1972 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 PODXLO00592 558 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 PPP6R2O75170 966 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 PIGRP01833 764 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 ZSCAN22P10073 491 aaPredicted RBP16.66■□□□□ 0.26
TRIM28-203ENST00000593582 MYBP10242 640 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 NMT1P30419 496 aaKnown RBP16.66■□□□□ 0.26
TRIM28-203ENST00000593582 RPL9P32969 192 aaKnown RBP16.66■□□□□ 0.26
TRIM28-203ENST00000593582 CYP26C1Q6V0L0 522 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 MAP4K3Q8IVH8 894 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 TDRD5Q8NAT2 981 aaKnown RBP16.66■□□□□ 0.26
TRIM28-203ENST00000593582 EDAQ92838 391 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 C18orf25Q96B23 403 aaPredicted RBP16.66■□□□□ 0.26
TRIM28-203ENST00000593582 FIZ1Q96SL8 496 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 HAPLN2Q9GZV7 340 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 ST6GALNAC4Q9H4F1 302 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 SEL1LQ9UBV2 794 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 USTQ9Y2C2 406 aa16.66■□□□□ 0.26
TRIM28-203ENST00000593582 CCDC195A0A1B0GUA6 201 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 MYMKA6NI61 221 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 C2CD4DB7Z1M9 353 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
TRIM28-203ENST00000593582 RFPL2O75678 378 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 YEATS4O95619 227 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 CXCL8P10145 99 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 GAP43P17677 238 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 FGFR3P22607 806 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 PPP2R3AQ06190 1150 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 LILRA6Q6PI73 481 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 CCDC149Q6ZUS6 474 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 SFR1Q86XK3 245 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 SPRYD3Q8NCJ5 442 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 KREMEN2Q8NCW0 462 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 C3orf58Q8NDZ4 430 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 CLSTN3Q9BQT9 956 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 MSTO1Q9BUK6 570 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 NUB1Q9Y5A7 615 aa16.65■□□□□ 0.26
TRIM28-203ENST00000593582 A0A0B4J269 797 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 OGTO15294 1046 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 F13A1P00488 732 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 IGFBP6P24592 240 aaPredicted RBP16.64■□□□□ 0.25
TRIM28-203ENST00000593582 ZXDAP98168 799 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 FOXD4L6Q3SYB3 417 aaPredicted RBP16.64■□□□□ 0.25
TRIM28-203ENST00000593582 ZC2HC1CQ53FD0 456 aaPredicted RBP16.64■□□□□ 0.25
TRIM28-203ENST00000593582 CD300LGQ6UXG3 332 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 FOXD4L3Q6VB84 417 aaPredicted RBP16.64■□□□□ 0.25
TRIM28-203ENST00000593582 OTOP3Q7RTS5 596 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 ZNF720Q7Z2F6 126 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 PLCD3Q8N3E9 789 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 PDILTQ8N807 584 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 ACSF2Q96CM8 615 aaPredicted RBP16.64■□□□□ 0.25
TRIM28-203ENST00000593582 RHOBTB2Q9BYZ6 727 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 MRPL44Q9H9J2 332 aaKnown RBP16.64■□□□□ 0.25
TRIM28-203ENST00000593582 RPF1Q9H9Y2 349 aaKnown RBP16.64■□□□□ 0.25
TRIM28-203ENST00000593582 ZDHHC7Q9NXF8 308 aa16.64■□□□□ 0.25
TRIM28-203ENST00000593582 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.64■□□□□ 0.25
TRIM28-203ENST00000593582 A0A087X0B3 334 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 TTC26A0AVF1 554 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 I3L4J1 428 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 CUTAO60888 179 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 IDEP14735 1019 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 TKTP29401 623 aaKnown RBP16.63■□□□□ 0.25
TRIM28-203ENST00000593582 TNFSF9P41273 254 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 BRCC3P46736 316 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 PTPN21Q16825 1174 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 LIN9Q5TKA1 542 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 ATL3Q6DD88 541 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 SLFN12LQ6IEE8 588 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 SLC39A4Q6P5W5 647 aa16.63■□□□□ 0.25
TRIM28-203ENST00000593582 ANKS3Q6ZW76 656 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms