RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 TMEM134Q9H6X4 195 aa19.66■□□□□ 0.74
CIRBP-243ENST00000593128 ARHGAP28Q9P2N2 729 aa19.66■□□□□ 0.74
CIRBP-243ENST00000593128 CDY1Q9Y6F8 540 aa19.66■□□□□ 0.74
CIRBP-243ENST00000593128 DOCK6Q96HP0 2047 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 DOCK8Q8NF50 2099 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 TRAPPC3O43617 180 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 XYLBO75191 536 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 C1RP00736 705 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 FGFR3P22607 806 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 NUBP1P53384 320 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 ARPP19P56211 112 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 ATP2C1P98194 919 aaPredicted RBP19.65■□□□□ 0.74
CIRBP-243ENST00000593128 CACNB1Q02641 598 aaPredicted RBP19.65■□□□□ 0.74
CIRBP-243ENST00000593128 MAPK7Q13164 816 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 UPP1Q16831 310 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 SEZ6Q53EL9 994 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 AXDND1Q5T1B0 1012 aaPredicted RBP19.65■□□□□ 0.74
CIRBP-243ENST00000593128 TAS1R3Q7RTX0 852 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 C3orf58Q8NDZ4 430 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 ACAP3Q96P50 834 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 PNMA5Q96PV4 448 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 SMC3Q9UQE7 1217 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 RBM19Q9Y4C8 960 aaKnown RBP19.65■□□□□ 0.74
CIRBP-243ENST00000593128 NUMBLQ9Y6R0 609 aa19.65■□□□□ 0.74
CIRBP-243ENST00000593128 CITO14578 2027 aa19.64■□□□□ 0.74
CIRBP-243ENST00000593128 NPHP3-ACAD11A0A0J9YXS1 232 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 PODXLO00592 558 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 CD2BP2O95400 341 aaKnown RBP19.64■□□□□ 0.73
CIRBP-243ENST00000593128 HNRNPA1P09651 372 aaKnown RBP eCLIP19.64■□□□□ 0.73
CIRBP-243ENST00000593128 MCF2P10911 925 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 NPR3P17342 541 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 SOX4Q06945 474 aaPredicted RBP19.64■□□□□ 0.73
CIRBP-243ENST00000593128 DHX8Q14562 1220 aaKnown RBP19.64■□□□□ 0.73
CIRBP-243ENST00000593128 MPZL3Q6UWV2 235 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 BICD1Q96G01 975 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 ZBTB45Q96K62 511 aaPredicted RBP19.64■□□□□ 0.73
CIRBP-243ENST00000593128 SLC38A7Q9NVC3 462 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 HCFC1R1Q9NWW0 138 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 MTRRQ9UBK8 725 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 NUB1Q9Y5A7 615 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 PIEZO1Q92508 2521 aa19.64■□□□□ 0.73
CIRBP-243ENST00000593128 TMEM189-UBE2V1I3L0A0 370 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 PLA2G4BP0C869 781 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 SRFP11831 508 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 PLS3P13797 630 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 AOC1P19801 751 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 GUCY2CP25092 1073 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 SMTNP53814 917 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 RAB33AQ14088 237 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 RSPO2Q6UXX9 243 aaPredicted RBP19.63■□□□□ 0.73
CIRBP-243ENST00000593128 RASSF8Q8NHQ8 419 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 GPR152Q8TDT2 470 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 NXPE3Q969Y0 559 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 C18orf25Q96B23 403 aaPredicted RBP19.63■□□□□ 0.73
CIRBP-243ENST00000593128 DDX27Q96GQ7 796 aaKnown RBP19.63■□□□□ 0.73
CIRBP-243ENST00000593128 SNX27Q96L92 541 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 ZMAT2Q96NC0 199 aaKnown RBP19.63■□□□□ 0.73
CIRBP-243ENST00000593128 TIPINQ9BVW5 301 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 PTPRHQ9HD43 1115 aa19.63■□□□□ 0.73
CIRBP-243ENST00000593128 KRBA1A5PL33 1030 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 HTR4Q13639 388 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 NOLC1Q14978 699 aaKnown RBP eCLIP19.62■□□□□ 0.73
CIRBP-243ENST00000593128 SPECC1Q5M775 1068 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 CD300LGQ6UXG3 332 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 ANKS3Q6ZW76 656 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 ITFG1Q8TB96 612 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 ING5Q8WYH8 240 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 RTP3Q9BQQ7 232 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 C17orf75Q9HAS0 396 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 WNT16Q9UBV4 365 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 CDH7Q9ULB5 785 aa19.62■□□□□ 0.73
CIRBP-243ENST00000593128 MYH15Q9Y2K3 1946 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 PRRG1O14668 218 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 ELF1P32519 619 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 MCM4P33991 863 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 SPAG1Q07617 926 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 VARS2Q5ST30 1063 aaKnown RBP19.61■□□□□ 0.73
CIRBP-243ENST00000593128 PARM1Q6UWI2 310 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 ALKAL1Q6UXT8 129 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 SYT2Q8N9I0 419 aaPredicted RBP19.61■□□□□ 0.73
CIRBP-243ENST00000593128 FGF13Q92913 245 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 RPP25Q9BUL9 199 aaKnown RBP19.61■□□□□ 0.73
CIRBP-243ENST00000593128 ZHX3Q9H4I2 956 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 TBC1D17Q9HA65 648 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 USP34Q70CQ2 3546 aa19.61■□□□□ 0.73
CIRBP-243ENST00000593128 TOM1L1O75674 476 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 PAPLNO95428 1278 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 MAPTP10636 758 aaKnown RBP19.6■□□□□ 0.73
CIRBP-243ENST00000593128 PROZP22891 400 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 HOXA9P31269 272 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 SLC12A3P55017 1021 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 PABPC1LQ4VXU2 614 aaKnown RBP19.6■□□□□ 0.73
CIRBP-243ENST00000593128 LARP1BQ659C4 914 aaKnown RBP19.6■□□□□ 0.73
CIRBP-243ENST00000593128 FRMD5Q7Z6J6 570 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 DTWD2Q8NBA8 298 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 TMEM161BQ8NDZ6 487 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 FGF14Q92915 247 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 CALML4Q96GE6 196 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 CNTN3Q9P232 1028 aa19.6■□□□□ 0.73
CIRBP-243ENST00000593128 DAXXQ9UER7 740 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms