RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 BRCC3P46736 316 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 SOX4Q06945 474 aaPredicted RBP22.46■■□□□ 1.19
TRIM47-207ENST00000593089 RAB33AQ14088 237 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 AXDND1Q5T1B0 1012 aaPredicted RBP22.46■■□□□ 1.19
TRIM47-207ENST00000593089 RINT1Q6NUQ1 792 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 CD300LGQ6UXG3 332 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 TAS1R3Q7RTX0 852 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 C3orf58Q8NDZ4 430 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 DRC1Q96MC2 740 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 MMTAG2Q9BU76 263 aaKnown RBP22.46■■□□□ 1.19
TRIM47-207ENST00000593089 TARS2Q9BW92 718 aaKnown RBP22.46■■□□□ 1.19
TRIM47-207ENST00000593089 PTPRHQ9HD43 1115 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 TOPORSQ9NS56 1045 aaPredicted RBP22.46■■□□□ 1.19
TRIM47-207ENST00000593089 ARHGAP28Q9P2N2 729 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 MTRRQ9UBK8 725 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 DAXXQ9UER7 740 aaPredicted RBP22.46■■□□□ 1.19
TRIM47-207ENST00000593089 CDY1Q9Y6F8 540 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 SFI1A8K8P3 1242 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 XYLBO75191 536 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 MAPK7Q13164 816 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 RSPO2Q6UXX9 243 aaPredicted RBP22.45■■□□□ 1.18
TRIM47-207ENST00000593089 C1orf186Q6ZWK4 172 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 ASCL5Q7RTU5 278 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 FRMD5Q7Z6J6 570 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 DTWD2Q8NBA8 298 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 DDX27Q96GQ7 796 aaKnown RBP22.45■■□□□ 1.18
TRIM47-207ENST00000593089 TCHPQ9BT92 498 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 CDH7Q9ULB5 785 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 KIF3AQ9Y496 699 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 ZFP37Q9Y6Q3 630 aaPredicted RBP22.45■■□□□ 1.18
TRIM47-207ENST00000593089 MYH15Q9Y2K3 1946 aa22.45■■□□□ 1.18
TRIM47-207ENST00000593089 MYO15AQ9UKN7 3530 aa22.44■■□□□ 1.18
TRIM47-207ENST00000593089 SLC16A4O15374 487 aa22.44■■□□□ 1.18
TRIM47-207ENST00000593089 TRAPPC3O43617 180 aa22.44■■□□□ 1.18
TRIM47-207ENST00000593089 HARSP12081 509 aaKnown RBP22.44■■□□□ 1.18
TRIM47-207ENST00000593089 HOXA9P31269 272 aa22.44■■□□□ 1.18
TRIM47-207ENST00000593089 MYH11P35749 1972 aa22.44■■□□□ 1.18
TRIM47-207ENST00000593089 RAD51AP2Q09MP3 1159 aa22.44■■□□□ 1.18
TRIM47-207ENST00000593089 ANGPT1Q15389 498 aa22.44■■□□□ 1.18
TRIM47-207ENST00000593089 ALKAL1Q6UXT8 129 aa22.44■■□□□ 1.18
TRIM47-207ENST00000593089 FGF14Q92915 247 aa22.44■■□□□ 1.18
TRIM47-207ENST00000593089 RPP25Q9BUL9 199 aaKnown RBP22.44■■□□□ 1.18
TRIM47-207ENST00000593089 TBC1D17Q9HA65 648 aa22.44■■□□□ 1.18
TRIM47-207ENST00000593089 RBM19Q9Y4C8 960 aaKnown RBP22.44■■□□□ 1.18
TRIM47-207ENST00000593089 ZFHX2Q9C0A1 2572 aaPredicted RBP22.44■■□□□ 1.18
TRIM47-207ENST00000593089 CITO14578 2027 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 MCF2P10911 925 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 UVSSAQ2YD98 709 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 XKR4Q5GH76 650 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 PARM1Q6UWI2 310 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 ANKS3Q6ZW76 656 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 ITFG1Q8TB96 612 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 FGF13Q92913 245 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 SNX27Q96L92 541 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 ZMAT2Q96NC0 199 aaKnown RBP22.43■■□□□ 1.18
TRIM47-207ENST00000593089 ACAP3Q96P50 834 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 PLIN2Q99541 437 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 ARHGEF3Q9NR81 526 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 SLC38A7Q9NVC3 462 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 HCFC1R1Q9NWW0 138 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 BACE2Q9Y5Z0 518 aa22.43■■□□□ 1.18
TRIM47-207ENST00000593089 PRR23AA6NEV1 266 aa22.42■■□□□ 1.18
TRIM47-207ENST00000593089 PODXLO00592 558 aa22.42■■□□□ 1.18
TRIM47-207ENST00000593089 PROZP22891 400 aa22.42■■□□□ 1.18
TRIM47-207ENST00000593089 ATP2C1P98194 919 aaPredicted RBP22.42■■□□□ 1.18
TRIM47-207ENST00000593089 RABEP1Q15276 862 aa22.42■■□□□ 1.18
TRIM47-207ENST00000593089 RILPL1Q5EBL4 403 aa22.42■■□□□ 1.18
TRIM47-207ENST00000593089 MPZL3Q6UWV2 235 aa22.42■■□□□ 1.18
TRIM47-207ENST00000593089 ZBTB45Q96K62 511 aaPredicted RBP22.42■■□□□ 1.18
TRIM47-207ENST00000593089 PNMA5Q96PV4 448 aa22.42■■□□□ 1.18
TRIM47-207ENST00000593089 C17orf75Q9HAS0 396 aa22.42■■□□□ 1.18
TRIM47-207ENST00000593089 SLC2A4RGQ9NR83 387 aa22.42■■□□□ 1.18
TRIM47-207ENST00000593089 DNMT3BQ9UBC3 853 aaKnown RBP22.42■■□□□ 1.18
TRIM47-207ENST00000593089 ABLIM1O14639 778 aa22.41■■□□□ 1.18
TRIM47-207ENST00000593089 GUCY2CP25092 1073 aa22.41■■□□□ 1.18
TRIM47-207ENST00000593089 STRN3Q13033 797 aa22.41■■□□□ 1.18
TRIM47-207ENST00000593089 PABPC1LQ4VXU2 614 aaKnown RBP22.41■■□□□ 1.18
TRIM47-207ENST00000593089 SPECC1Q5M775 1068 aa22.41■■□□□ 1.18
TRIM47-207ENST00000593089 NKD2Q969F2 451 aaPredicted RBP22.41■■□□□ 1.18
TRIM47-207ENST00000593089 TIPINQ9BVW5 301 aa22.41■■□□□ 1.18
TRIM47-207ENST00000593089 ANKFY1Q9P2R3 1169 aa22.41■■□□□ 1.18
TRIM47-207ENST00000593089 NOTCH4Q99466 2003 aa22.41■■□□□ 1.18
TRIM47-207ENST00000593089 VWA3AA6NCI4 1184 aa22.4■■□□□ 1.18
TRIM47-207ENST00000593089 POU2F2P09086 479 aa22.4■■□□□ 1.18
TRIM47-207ENST00000593089 GPC5P78333 572 aa22.4■■□□□ 1.18
TRIM47-207ENST00000593089 ROR1Q01973 937 aa22.4■■□□□ 1.18
TRIM47-207ENST00000593089 SEZ6Q53EL9 994 aa22.4■■□□□ 1.18
TRIM47-207ENST00000593089 VARS2Q5ST30 1063 aaKnown RBP22.4■■□□□ 1.18
TRIM47-207ENST00000593089 MTSS1LQ765P7 747 aa22.4■■□□□ 1.18
TRIM47-207ENST00000593089 C18orf25Q96B23 403 aaPredicted RBP22.4■■□□□ 1.18
TRIM47-207ENST00000593089 CDK5RAP3Q96JB5 506 aa22.4■■□□□ 1.18
TRIM47-207ENST00000593089 CNTN3Q9P232 1028 aa22.4■■□□□ 1.18
TRIM47-207ENST00000593089 NUB1Q9Y5A7 615 aa22.4■■□□□ 1.18
TRIM47-207ENST00000593089 PDCD11Q14690 1871 aaKnown RBP22.39■■□□□ 1.18
TRIM47-207ENST00000593089 H3BQV1 296 aa22.39■■□□□ 1.17
TRIM47-207ENST00000593089 MEFVO15553 781 aaPredicted RBP22.39■■□□□ 1.17
TRIM47-207ENST00000593089 DCNP07585 359 aaKnown RBP22.39■■□□□ 1.17
TRIM47-207ENST00000593089 PLS3P13797 630 aa22.39■■□□□ 1.17
TRIM47-207ENST00000593089 KCNE1P15382 129 aa22.39■■□□□ 1.17
TRIM47-207ENST00000593089 GJB2P29033 226 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms