RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CBWD2Q8IUF1 395 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 ADSSL1Q8N142 457 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 TMEM169Q96HH4 297 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 TSPAN18Q96SJ8 248 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 CACNG4Q9UBN1 327 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 PRG3Q9Y2Y8 225 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-221ENST00000593026 PDCD11Q14690 1871 aaKnown RBP16.22■□□□□ 0.19
DDX39A-221ENST00000593026 PSMA7O14818 248 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 GRM6O15303 877 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 XPOTO43592 962 aaKnown RBP16.21■□□□□ 0.19
DDX39A-221ENST00000593026 LPXNO60711 386 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 PLCB3Q01970 1234 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 SOX4Q06945 474 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-221ENST00000593026 MYBPC2Q14324 1141 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 SNRNP35Q16560 246 aaKnown RBP16.21■□□□□ 0.19
DDX39A-221ENST00000593026 PTPROQ16827 1216 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 JADE1Q6IE81 842 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 TMEM173Q86WV6 379 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-221ENST00000593026 SLC9A9Q8IVB4 645 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 RDH13Q8NBN7 331 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 SPPL3Q8TCT6 385 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 MYLIPQ8WY64 445 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 C18orf25Q96B23 403 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-221ENST00000593026 IGSF21Q96ID5 467 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 FBXL18Q96ME1 805 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 UROC1Q96N76 676 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 PAAF1Q9BRP4 392 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 COLEC11Q9BWP8 271 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 GOLGA2P5Q9HBQ8 144 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 DMAC2Q9NW81 257 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 PUF60Q9UHX1 559 aaKnown RBP16.21■□□□□ 0.19
DDX39A-221ENST00000593026 UBQLN1Q9UMX0 589 aaKnown RBP16.21■□□□□ 0.19
DDX39A-221ENST00000593026 DERAQ9Y315 318 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-221ENST00000593026 SZT2Q5T011 3432 aa16.21■□□□□ 0.19
DDX39A-221ENST00000593026 ANK1P16157 1881 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 PLXNA4Q9HCM2 1894 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 NFICP08651 508 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 CD44P16070 742 aaKnown RBP16.2■□□□□ 0.18
DDX39A-221ENST00000593026 PTMSP20962 102 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 IGFBP4P22692 258 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 NR2F2P24468 414 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 RPL13P26373 211 aaKnown RBP16.2■□□□□ 0.18
DDX39A-221ENST00000593026 UBE3AQ05086 875 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 ADGRE1Q14246 886 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 TMEM132DQ14C87 1099 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 NFIL3Q16649 462 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 ZCWPW2Q504Y3 356 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 BEST2Q8NFU1 509 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 TMEM174Q8WUU8 243 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 BCL7CQ8WUZ0 217 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-221ENST00000593026 POF1BQ8WVV4 589 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 RABGGTAQ92696 567 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 DDX27Q96GQ7 796 aaKnown RBP16.2■□□□□ 0.18
DDX39A-221ENST00000593026 DHTKD1Q96HY7 919 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-221ENST00000593026 TSG101Q99816 390 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 LMAN2LQ9H0V9 348 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 TUBGCP4Q9UGJ1 667 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 LZTS1Q9Y250 596 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 C2CD2Q9Y426 696 aa16.2■□□□□ 0.18
DDX39A-221ENST00000593026 CSPG5O95196 566 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 KIF4AO95239 1232 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 FOSL2P15408 326 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 CLCNKBP51801 687 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 WNT7BP56706 349 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 SURF1Q15526 300 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 ZBTB6Q15916 424 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 EDRF1Q3B7T1 1238 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 CCDC183Q5T5S1 534 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 CEP135Q66GS9 1140 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 CENPPQ6IPU0 288 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 KLHL10Q6JEL2 608 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 NT5DC4Q86YG4 428 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 PDE11AQ9HCR9 933 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 MARCH5Q9NX47 278 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 LMCD1Q9NZU5 365 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 ADAM28Q9UKQ2 775 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 FRMD4BQ9Y2L6 1034 aa16.19■□□□□ 0.18
DDX39A-221ENST00000593026 PPP1R3GB7ZBB8 358 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 F8W810 466 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 PODXLO00592 558 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 TADA2AO75478 443 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 B3GAT3O94766 335 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 CYP3A5P20815 502 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 CCNE1P24864 410 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 DNAJB1P25685 340 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 RPL9P32969 192 aaKnown RBP16.18■□□□□ 0.18
DDX39A-221ENST00000593026 LRRC63Q05C16 580 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 CYP24A1Q07973 514 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 ADAM9Q13443 819 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 UPP1Q16831 310 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 SPATA1Q5VX52 437 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 ANKRD40Q6AI12 368 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 DDX53Q86TM3 631 aaKnown RBP16.18■□□□□ 0.18
DDX39A-221ENST00000593026 EFCAB13Q8IY85 973 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 HASPINQ8TF76 798 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 MRPL38Q96DV4 380 aaKnown RBP16.18■□□□□ 0.18
DDX39A-221ENST00000593026 TLR9Q9NR96 1032 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 STK39Q9UEW8 545 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 MTCH2Q9Y6C9 303 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms