RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ZPBP2Q6X784 338 aa12.96□□□□□ -0.33
DDX39A-219ENST00000592927 APBB1IPQ7Z5R6 666 aaPredicted RBP12.96□□□□□ -0.33
DDX39A-219ENST00000592927 MAP4K3Q8IVH8 894 aa12.96□□□□□ -0.33
DDX39A-219ENST00000592927 FAM114A1Q8IWE2 563 aa12.96□□□□□ -0.33
DDX39A-219ENST00000592927 SYCP3Q8IZU3 236 aa12.96□□□□□ -0.33
DDX39A-219ENST00000592927 ANKRD20A12PQ8NF67 263 aa12.96□□□□□ -0.33
DDX39A-219ENST00000592927 ZNF507Q8TCN5 953 aa12.96□□□□□ -0.33
DDX39A-219ENST00000592927 MRFAP1L1Q96HT8 127 aa12.96□□□□□ -0.33
DDX39A-219ENST00000592927 ACO2Q99798 780 aaKnown RBP12.96□□□□□ -0.33
DDX39A-219ENST00000592927 ADPGKQ9BRR6 497 aa12.96□□□□□ -0.33
DDX39A-219ENST00000592927 TARS2Q9BW92 718 aaKnown RBP12.96□□□□□ -0.33
DDX39A-219ENST00000592927 STRA6Q9BX79 667 aa12.96□□□□□ -0.33
DDX39A-219ENST00000592927 TRIM6Q9C030 488 aaPredicted RBP12.96□□□□□ -0.33
DDX39A-219ENST00000592927 THAP9Q9H5L6 903 aa12.96□□□□□ -0.33
DDX39A-219ENST00000592927 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
DDX39A-219ENST00000592927 HNRNPDLO14979 420 aaKnown RBP12.95□□□□□ -0.34
DDX39A-219ENST00000592927 AP5Z1O43299 807 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 EDN1P05305 212 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 TPM3P06753 285 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 LIG4P49917 911 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 RAB27AP51159 221 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 ZNF75DP51815 510 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 FANCCQ00597 558 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 ADAM15Q13444 863 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 CDR2LQ86X02 465 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-219ENST00000592927 GLIS3Q8NEA6 775 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 SCFD1Q8WVM8 642 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 TCHPQ9BT92 498 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 TRAIPQ9BWF2 469 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 PDZD7Q9H5P4 517 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 TMEM206Q9H813 350 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 FAM105AQ9NUU6 356 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 LRFN2Q9ULH4 789 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 TNFSF13BQ9Y275 285 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 PCDHB7Q9Y5E2 793 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 PCDHB2Q9Y5E7 798 aa12.95□□□□□ -0.34
DDX39A-219ENST00000592927 CACNA1GO43497 2377 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 KMT2BQ9UMN6 2715 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-219ENST00000592927 A0A0U1RQF3 1178 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 C9IYK1 514 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 PDXKO00764 312 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 TOM1L1O75674 476 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 NPTXRO95502 500 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 SERPINC1P01008 464 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 PIGRP01833 764 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 STAG3L1P0CL83 205 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 EEF1GP26641 437 aaKnown RBP12.94□□□□□ -0.34
DDX39A-219ENST00000592927 MATR3P43243 847 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDX39A-219ENST00000592927 FAM189BP81408 668 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 KCNA1Q09470 495 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 KNOP1Q1ED39 458 aaKnown RBP12.94□□□□□ -0.34
DDX39A-219ENST00000592927 EDRF1Q3B7T1 1238 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 DCAF4L1Q3SXM0 396 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 ZCWPW2Q504Y3 356 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 UBXN11Q5T124 520 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 EEF1DP3Q658K8 133 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 ANKRD40Q6AI12 368 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 ECHDC2Q86YB7 292 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 HACE1Q8IYU2 909 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 CSGALNACT2Q8N6G5 542 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 RNF169Q8NCN4 708 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 MSLNLQ96KJ4 702 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 RPGRIP1Q96KN7 1286 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 RIPOR3Q96MK2 946 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 YME1L1Q96TA2 773 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 DUSP9Q99956 384 aaKnown RBP12.94□□□□□ -0.34
DDX39A-219ENST00000592927 EIF2AQ9BY44 585 aaKnown RBP12.94□□□□□ -0.34
DDX39A-219ENST00000592927 SAMSN1Q9NSI8 373 aaKnown RBP12.94□□□□□ -0.34
DDX39A-219ENST00000592927 ANKFY1Q9P2R3 1169 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 TRAF3IP3Q9Y228 551 aa12.94□□□□□ -0.34
DDX39A-219ENST00000592927 RIF1Q5UIP0 2472 aaKnown RBP12.94□□□□□ -0.34
DDX39A-219ENST00000592927 TRIM49BA6NDI0 452 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 LRRC10BA6NIK2 292 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 GRM6O15303 877 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 CLDN3O15551 220 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 CALUO43852 315 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-219ENST00000592927 ZNF623O75123 536 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 UPP2O95045 317 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 CSPG5O95196 566 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 EOMESO95936 686 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 ATP1A3P13637 1013 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 NDUFV1P49821 464 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 PMS1P54277 932 aaKnown RBP12.93□□□□□ -0.34
DDX39A-219ENST00000592927 UBASH3AP57075 661 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 SNRPFP62306 86 aaKnown RBP12.93□□□□□ -0.34
DDX39A-219ENST00000592927 FKBP3Q00688 224 aaKnown RBP12.93□□□□□ -0.34
DDX39A-219ENST00000592927 NFIL3Q16649 462 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 ZNF568Q3ZCX4 644 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 FILIP1LQ4L180 1135 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 SLFN12LQ6IEE8 588 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 MPZL3Q6UWV2 235 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 ZBTB33Q86T24 672 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 NPAS4Q8IUM7 802 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 NELFCDQ8IXH7 590 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 GOLGA5Q8TBA6 731 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 TOP1MTQ969P6 601 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 PGBD4Q96DM1 585 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 ZBTB45Q96K62 511 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-219ENST00000592927 CEP63Q96MT8 703 aa12.93□□□□□ -0.34
DDX39A-219ENST00000592927 SRRTQ9BXP5 876 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms