RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 NRP1O14786 923 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 TEX33O43247 280 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 TOX4O94842 621 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 PCSK1P29120 753 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 PRDX5P30044 214 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 CSF2RBP32927 897 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 ADCY7P51828 1080 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 STK3Q13188 491 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 FLYWCH1Q4VC44 716 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 VWA3BQ502W6 1294 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 INO80DQ53TQ3 878 aaPredicted RBP7.71□□□□□ -1.18
VMP1-215ENST00000592619 ZMAT1Q5H9K5 638 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 CNKSR3Q6P9H4 555 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 USP30Q70CQ3 517 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 PDZD4Q76G19 769 aaPredicted RBP7.71□□□□□ -1.18
VMP1-215ENST00000592619 ZNF572Q7Z3I7 529 aaPredicted RBP7.71□□□□□ -1.18
VMP1-215ENST00000592619 FAM90A1Q86YD7 464 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 SH2D3CQ8N5H7 860 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 SPATA25Q9BR10 227 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 UNKQ9C0B0 810 aaKnown RBP7.71□□□□□ -1.18
VMP1-215ENST00000592619 KIAA1683Q9H0B3 1180 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 LDAHQ9H6V9 325 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 BARX1Q9HBU1 254 aaPredicted RBP7.71□□□□□ -1.18
VMP1-215ENST00000592619 STARD7Q9NQZ5 370 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 SIDT1Q9NXL6 827 aaKnown RBP7.71□□□□□ -1.18
VMP1-215ENST00000592619 CHD1O14646 1710 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 ATRNL1Q5VV63 1379 aa7.71□□□□□ -1.18
VMP1-215ENST00000592619 C9orf118A6NHY6 69 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 ETV2O00321 342 aaPredicted RBP7.7□□□□□ -1.18
VMP1-215ENST00000592619 PAX4O43316 350 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 MED14OSP0DP75 135 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 TXKP42681 527 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 IRAK1P51617 712 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 FMO1Q01740 532 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 ZNF543Q08ER8 600 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 CNGA2Q16280 664 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 PRAMEF14Q5SWL7 426 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 EMC10Q5UCC4 262 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 VPS37AQ8NEZ2 397 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 BRIX1Q8TDN6 353 aaKnown RBP7.7□□□□□ -1.18
VMP1-215ENST00000592619 SUCLG2Q96I99 432 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 MSLNLQ96KJ4 702 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 MRGPRX1Q96LB2 322 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 PWWP2AQ96N64 755 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 KRTAP4-9Q9BYQ8 210 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 MRPL46Q9H2W6 279 aaKnown RBP7.7□□□□□ -1.18
VMP1-215ENST00000592619 ZNF287Q9HBT7 754 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 CNNM1Q9NRU3 951 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 PIH1D1Q9NWS0 290 aaKnown RBP7.7□□□□□ -1.18
VMP1-215ENST00000592619 MOCS1Q9NZB8 636 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 USP19O94966 1318 aa7.7□□□□□ -1.18
VMP1-215ENST00000592619 ADAMTS12P58397 1594 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 F2RL2O00254 374 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 KPNA5O15131 536 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 CYP1A1P04798 512 aaPredicted RBP7.69□□□□□ -1.18
VMP1-215ENST00000592619 ZNF888P0CJ79 500 aaPredicted RBP7.69□□□□□ -1.18
VMP1-215ENST00000592619 ALOX15P16050 662 aaPredicted RBP7.69□□□□□ -1.18
VMP1-215ENST00000592619 NPR1P16066 1061 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 SLC7A1P30825 629 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 TRAPPC10P48553 1259 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 ADAM8P78325 824 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 HGFACQ04756 655 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 FAM26FQ5R3K3 315 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 IZUMO3Q5VZ72 239 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 REPS2Q8NFH8 660 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 CDC5LQ99459 802 aaKnown RBP7.69□□□□□ -1.18
VMP1-215ENST00000592619 COLEC11Q9BWP8 271 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 ENKD1Q9H0I2 346 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 PPCSQ9HAB8 311 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 ARFGAP3Q9NP61 516 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 OGDHLQ9ULD0 1010 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 PCDHA1Q9Y5I3 950 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 SNX13Q9Y5W8 968 aa7.69□□□□□ -1.18
VMP1-215ENST00000592619 SYNJ2O15056 1496 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 ARID1BQ8NFD5 2236 aaPredicted RBP7.68□□□□□ -1.18
VMP1-215ENST00000592619 CUL7Q14999 1698 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 PMS2P1A4D2B8 440 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 KITP10721 976 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 EN2P19622 333 aaPredicted RBP7.68□□□□□ -1.18
VMP1-215ENST00000592619 FPR1P21462 350 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 TNFSF4P23510 183 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 PTPN7P35236 360 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 SARSP49591 514 aaKnown RBP7.68□□□□□ -1.18
VMP1-215ENST00000592619 ARFIP2P53365 341 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 BPIFB4P59827 614 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 ATP2C1P98194 919 aaPredicted RBP7.68□□□□□ -1.18
VMP1-215ENST00000592619 NFYCQ13952 458 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 ATP2B3Q16720 1220 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 FAM47AQ5JRC9 791 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 KHDC1LQ5JSQ8 128 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 DACT2Q5SW24 774 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 OTUD7BQ6GQQ9 843 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 SKAP1Q86WV1 359 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 PPP1R3BQ86XI6 285 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 PLXDC1Q8IUK5 500 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 ZDHHC14Q8IZN3 488 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 TXNDC5Q8NBS9 432 aaKnown RBP7.68□□□□□ -1.18
VMP1-215ENST00000592619 KBTBD7Q8WVZ9 684 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 STON2Q8WXE9 905 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 BRI3BPQ8WY22 251 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms