RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 CD302Q8IX05 232 aa16.89■□□□□ 0.29
MBD1-227ENST00000592060 BBXQ8WY36 941 aaPredicted RBP16.89■□□□□ 0.29
MBD1-227ENST00000592060 BTBD6Q96KE9 485 aa16.89■□□□□ 0.29
MBD1-227ENST00000592060 RUFY1Q96T51 708 aa16.89■□□□□ 0.29
MBD1-227ENST00000592060 GOLGA6AQ9NYA3 693 aa16.89■□□□□ 0.29
MBD1-227ENST00000592060 GOLGA6L10A0A0M3HER8 536 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 TTLL13PA6NNM8 815 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 HSPA6P17066 643 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 PPFIA1Q13136 1202 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
MBD1-227ENST00000592060 BIRC3Q13489 604 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 Q3C1V9 767 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 CELF3Q5SZQ8 465 aaKnown RBP16.88■□□□□ 0.29
MBD1-227ENST00000592060 KCNV1Q6PIU1 500 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 GOLGA6L1Q8N7Z2 621 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 PRPF31Q8WWY3 499 aaKnown RBP16.88■□□□□ 0.29
MBD1-227ENST00000592060 ARL8AQ96BM9 186 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 AVENQ9NQS1 362 aaPredicted RBP16.88■□□□□ 0.29
MBD1-227ENST00000592060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■■■□□ 16.4
MBD1-227ENST00000592060 CNOT8Q9UFF9 292 aaKnown RBP16.88■□□□□ 0.29
MBD1-227ENST00000592060 PCDHB2Q9Y5E7 798 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 IGKV6-21A0A0C4DH24 114 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 DAPK3O43293 454 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 MSCO60682 206 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 CUL2Q13617 745 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 HSDL1Q3SXM5 330 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 IER5Q5VY09 327 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 GPAT2Q6NUI2 795 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 TRIM50Q86XT4 487 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 BRSK2Q8IWQ3 736 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 OR5B17Q8NGF7 314 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 FAM76AQ8TAV0 307 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 ATP8B4Q8TF62 1192 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 MMP19Q99542 508 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 MPHOSPH6Q99547 160 aaKnown RBP16.88■□□□□ 0.29
MBD1-227ENST00000592060 TRIM51Q9BSJ1 452 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 AZI2Q9H6S1 392 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 PCDHA3Q9Y5H8 950 aa16.88■□□□□ 0.29
MBD1-227ENST00000592060 ZSWIM8A7E2V4 1837 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 CCDC66A2RUB6 948 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 GAS2O43903 313 aaKnown RBP16.87■□□□□ 0.29
MBD1-227ENST00000592060 PHF2O75151 1096 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 CYP1A1P04798 512 aaPredicted RBP16.87■□□□□ 0.29
MBD1-227ENST00000592060 CLTAP09496 248 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 CAPN2P17655 700 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 NF2P35240 595 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 ACTN2P35609 894 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 EFNA5P52803 228 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 BPIFB4P59827 614 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 CCDC62Q6P9F0 684 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 ADAT2Q7Z6V5 191 aaKnown RBP16.87■□□□□ 0.29
MBD1-227ENST00000592060 MCOLN2Q8IZK6 566 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 ZDHHC14Q8IZN3 488 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 OPTNQ96CV9 577 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 SPON1Q9HCB6 807 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 FAM114A2Q9NRY5 505 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 CNTN6Q9UQ52 1028 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 ANK1P16157 1881 aa16.87■□□□□ 0.29
MBD1-227ENST00000592060 FAM187AA6NFU0 413 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 ABLIM1O14639 778 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 RPS6KA5O75582 802 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 MARK3P27448 753 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 CENPCQ03188 943 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 DHX34Q14147 1143 aaKnown RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 UAP1Q16222 522 aaPredicted RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 KCTD19Q17RG1 926 aaPredicted RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 SEZ6Q53EL9 994 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 SEL1L2Q5TEA6 688 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 PLPPR4Q7Z2D5 763 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 PRELID2Q8N945 189 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 UTP11Q9Y3A2 253 aaKnown RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 UMODL1Q5DID0 1318 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 SPOPO43791 374 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 SHOX2O60902 331 aaPredicted RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 PYGMP11217 842 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 PTGIRP43119 386 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 NOP14P78316 857 aaKnown RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 DR1Q01658 176 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 LAMTOR4Q0VGL1 99 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 GRM1Q13255 1194 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 PLCB4Q15147 1175 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 C9orf131Q5VYM1 1079 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 DUPD1Q68J44 220 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 USP50Q70EL3 339 aaPredicted RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 FBXO16Q8IX29 292 aaPredicted RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 UBR7Q8N806 425 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 TCP11Q8WWU5 503 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 GLG1Q92896 1179 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 L3MBTL3Q96JM7 780 aaPredicted RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 ACO2Q99798 780 aaKnown RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 MRPL4Q9BYD3 311 aaKnown RBP16.86■□□□□ 0.29
MBD1-227ENST00000592060 RAB17Q9H0T7 212 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 NUB1Q9Y5A7 615 aa16.86■□□□□ 0.29
MBD1-227ENST00000592060 MROH7Q68CQ1 1323 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 CLDN3O15551 220 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 TOM1L1O75674 476 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 KRT14P02533 472 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 MYBL1P10243 752 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 HARSP12081 509 aaKnown RBP16.85■□□□□ 0.29
MBD1-227ENST00000592060 OSBPP22059 807 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms