RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 GLUD2P49448 558 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 ASIC1P78348 528 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 NUCB2P80303 420 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 TUSC3Q13454 348 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 FUT10Q6P4F1 479 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 TMC5Q6UXY8 1006 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 MAP4K3Q8IVH8 894 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 CCDC65Q8IXS2 484 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 HASPINQ8TF76 798 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 EDAQ92838 391 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 NECTIN4Q96NY8 510 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 ACAP3Q96P50 834 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 LRRC27Q9C0I9 530 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 GDPD2Q9HCC8 539 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 ADAM28Q9UKQ2 775 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 KCNH3Q9ULD8 1083 aa15.21■□□□□ 0.03
CLIP3-205ENST00000592017 TADA2AO75478 443 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 MYBP10242 640 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 PFKFB1P16118 471 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 IGFBP6P24592 240 aaPredicted RBP15.2■□□□□ 0.02
CLIP3-205ENST00000592017 ABCD1P33897 745 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 MTHFRP42898 656 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 GTF2BQ00403 316 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 AMPD3Q01432 767 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 MCL1Q07820 350 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 HSP90AA2PQ14568 343 aaPredicted RBP15.2■□□□□ 0.02
CLIP3-205ENST00000592017 ATAT1Q5SQI0 421 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 CEP57L1Q8IYX8 460 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 SNX27Q96L92 541 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 TRIM9Q9C026 710 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 HAPLN2Q9GZV7 340 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 SCAND2PQ9GZW5 306 aaPredicted RBP15.2■□□□□ 0.02
CLIP3-205ENST00000592017 TSHZ2Q9NRE2 1034 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 KBTBD4Q9NVX7 518 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 SSX2IPQ9Y2D8 614 aa15.2■□□□□ 0.02
CLIP3-205ENST00000592017 A0A1B0GVL5 298 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 C2CD4DB7Z1M9 353 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 TISP43B9A030 160 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 KIF4AO95239 1232 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 PIGRP01833 764 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 CXCL8P10145 99 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 CASP1P29466 404 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 AFMP43652 599 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 CASP5P51878 434 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 ZXDAP98168 799 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 USP41Q3LFD5 358 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 ADALQ6DHV7 355 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 KIAA1841Q6NSI8 718 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 ZNF720Q7Z2F6 126 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 GPR149Q86SP6 731 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 GRAMD1CQ8IYS0 662 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 RIN2Q8WYP3 895 aaPredicted RBP15.19■□□□□ 0.02
CLIP3-205ENST00000592017 KCNN1Q92952 543 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 HPS3Q969F9 1004 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 HVCN1Q96D96 273 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 RIPOR3Q96MK2 946 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 PYM1Q9BRP8 204 aaKnown RBP15.19■□□□□ 0.02
CLIP3-205ENST00000592017 MSTO1Q9BUK6 570 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 FGFBP2Q9BYJ0 223 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 BLZF1Q9H2G9 400 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 IKZF4Q9H2S9 585 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 ST6GALNAC4Q9H4F1 302 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 MAGEF1Q9HAY2 307 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 GOLGA2P5Q9HBQ8 144 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 SERTAD1Q9UHV2 236 aa15.19■□□□□ 0.02
CLIP3-205ENST00000592017 SMIM28A0A1B0GU29 152 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 FRMD3A2A2Y4 597 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 ANKRD63C9JTQ0 380 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 ADH1AP07327 375 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 SPATA31D3P0C874 917 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 RPL17P18621 184 aaKnown RBP15.18■□□□□ 0.02
CLIP3-205ENST00000592017 TNFSF9P41273 254 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 XKR4Q5GH76 650 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 RTP2Q5QGT7 225 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 ZBTB41Q5SVQ8 909 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 L1TD1Q5T7N2 865 aaKnown RBP15.18■□□□□ 0.02
CLIP3-205ENST00000592017 SLC39A4Q6P5W5 647 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 CD300LGQ6UXG3 332 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 ALKAL1Q6UXT8 129 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 TRIM67Q6ZTA4 783 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 SPATA31D4Q6ZUB0 917 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 HFE2Q6ZVN8 426 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 PALB2Q86YC2 1186 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 GPR65Q8IYL9 337 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 PPP1R10Q96QC0 940 aaKnown RBP15.18■□□□□ 0.02
CLIP3-205ENST00000592017 ACCSQ96QU6 501 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 SFXN1Q9H9B4 322 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 MAN1C1Q9NR34 630 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 OLFML3Q9NRN5 406 aa15.18■□□□□ 0.02
CLIP3-205ENST00000592017 SF3B1O75533 1304 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLIP3-205ENST00000592017 TULP1O00294 542 aaPredicted RBP15.17■□□□□ 0.02
CLIP3-205ENST00000592017 OGTO15294 1046 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 MEFVO15553 781 aaPredicted RBP15.17■□□□□ 0.02
CLIP3-205ENST00000592017 PPP1R37O75864 691 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 CLTAP09496 248 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 CMA1P23946 247 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 PPP2R3AQ06190 1150 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 SPAG1Q07617 926 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 KCNA1Q09470 495 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 PTPN21Q16825 1174 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms