RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 HAUS5O94927 633 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 HLA-DRAP01903 254 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 SLC47A2Q86VL8 602 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 SMC1BQ8NDV3 1235 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 WRNIP1Q96S55 665 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 FAM129AQ9BZQ8 928 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 ASNSD1Q9NWL6 643 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 ZBTB12Q9Y330 459 aaPredicted RBP18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 EML1O00423 815 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 AFAP1L2Q8N4X5 818 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 FAM151AQ8WW52 585 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 KLC2Q9H0B6 622 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 KCNMB3Q9NPA1 279 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 CHD2O14647 1828 aaKnown RBP18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 FAM47DPA6NHR8 397 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 ZBTB39O15060 712 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 WDR46O15213 610 aaKnown RBP18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 SLITRK3O94933 977 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 CYP11B1P15538 503 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 MAGEA4P43358 317 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 SLC12A2P55011 1212 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 CDR2Q01850 454 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 C2CD6Q53TS8 623 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 MCEEQ96PE7 176 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 POP1Q99575 1024 aaKnown RBP18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 TMEM39BQ9GZU3 492 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 IFT122Q9HBG6 1241 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 GOLGA8RI6L899 631 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 RGL2O15211 777 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 MAP3K7O43318 606 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 NLRP7Q8WX94 980 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 DDX23Q9BUQ8 820 aaKnown RBP18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 ZNF408Q9H9D4 720 aa18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 PPARGC1AQ9UBK2 798 aaKnown RBP18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 MAGED2Q9UNF1 606 aaPredicted RBP18.14■□□□□ 0.49
SMARCA4-215ENST00000590574 PDZD4Q76G19 769 aaPredicted RBP18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 SERPINB12Q96P63 405 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 SLC38A10Q9HBR0 1119 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 EIF4E1BA6NMX2 242 aaKnown RBP18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 FAM167BQ9BTA0 163 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 SEMA4AQ9H3S1 761 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 TPX2Q9ULW0 747 aaKnown RBP18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 SCAF8Q9UPN6 1271 aaKnown RBP18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 ABCC6O95255 1503 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 M0QYV0 167 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 RARGP13631 454 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 MAP3K21Q5TCX8 1036 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 CCDC125Q86Z20 511 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 ZFPM1Q8IX07 1006 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 PPM1NQ8N819 430 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 ARHGEF26Q96DR7 871 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 TAAR1Q96RJ0 339 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 KITP10721 976 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 SKIP12755 728 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 MUTP22033 750 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 ARFIP2P53365 341 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 CENPCQ03188 943 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 PSMD6Q15008 389 aa18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 PRMT6Q96LA8 375 aaPredicted RBP18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 MOV10L1Q9BXT6 1211 aaKnown RBP18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 MRPL4Q9BYD3 311 aaKnown RBP18.13■□□□□ 0.49
SMARCA4-215ENST00000590574 CCDC195A0A1B0GUA6 201 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 LMNAP02545 664 aaKnown RBP18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 ARL4AP40617 200 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 CBWD6Q4V339 395 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 CBWD3Q5JTY5 395 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 CBWD5Q5RIA9 395 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 ARHGEF19Q8IW93 802 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 SGSM3Q96HU1 749 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 TTYH3Q9C0H2 523 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 FECHP22830 423 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 TFDP2Q14188 446 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 TKFCQ3LXA3 575 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 CRLF3Q8IUI8 442 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 SMG5Q9UPR3 1016 aaKnown RBP18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 GAKO14976 1311 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 CFAP69A5D8W1 941 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 CRCPO75575 148 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 NCOA4Q13772 614 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 OTOP1Q7RTM1 612 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 ACAD9Q9H845 621 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 SENP1Q9P0U3 644 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 ROR1Q01973 937 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 SYCP2LQ5T4T6 812 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 C11orf63Q6NUN7 778 aa18.12■□□□□ 0.49
SMARCA4-215ENST00000590574 IGF2BP3O00425 579 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 CIITAP33076 1130 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 RAD23BP54727 409 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 TAP1Q03518 808 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 KCTD19Q17RG1 926 aaPredicted RBP18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 NCAPGQ9BPX3 1015 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 CDC42EP4Q9H3Q1 356 aaKnown RBP18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 HOXC10Q9NYD6 342 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 PARP4Q9UKK3 1724 aaKnown RBP18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 NR3C2P08235 984 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 ITIH4Q14624 930 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 ZC3H18Q86VM9 953 aaKnown RBP18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 PSPC1Q8WXF1 523 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms