RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 HAPLN3Q96S86 360 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 MTA3Q9BTC8 594 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 BRD8Q9H0E9 1235 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 CYP26A1O43174 497 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 ECE2O60344 883 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 PENKP01210 267 aaPredicted RBP16.12■□□□□ 0.17
CIRBP-228ENST00000590347 RPL13P26373 211 aaKnown RBP16.12■□□□□ 0.17
CIRBP-228ENST00000590347 PCSK6P29122 969 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 CA8P35219 290 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 CCDC15Q0P6D6 951 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 SFSWAPQ12872 951 aaKnown RBP16.12■□□□□ 0.17
CIRBP-228ENST00000590347 R3HDM1Q15032 1099 aaKnown RBP16.12■□□□□ 0.17
CIRBP-228ENST00000590347 MAPK6Q16659 721 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 TMEM110Q86TL2 294 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 RPGRQ92834 1020 aaKnown RBP16.12■□□□□ 0.17
CIRBP-228ENST00000590347 ART4Q93070 314 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 KANSL3Q9P2N6 904 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 COL4A1P02462 1669 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 MEI4A8MW99 385 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 TP73O15350 636 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 SORBS2O94875 1100 aaKnown RBP16.11■□□□□ 0.17
CIRBP-228ENST00000590347 LMNAP02545 664 aaKnown RBP16.11■□□□□ 0.17
CIRBP-228ENST00000590347 ENO1P06733 434 aaKnown RBP16.11■□□□□ 0.17
CIRBP-228ENST00000590347 ESRRAP11474 423 aaPredicted RBP16.11■□□□□ 0.17
CIRBP-228ENST00000590347 CYP11B2P19099 503 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 KCNA1Q09470 495 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 DLG1Q12959 904 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 ACVR2BQ13705 512 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 CMPK2Q5EBM0 449 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 TXNRD3Q86VQ6 643 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 LRRC6Q86X45 466 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 WDR66Q8TBY9 1149 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 SLC20A1Q8WUM9 679 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 ARHGEF1Q92888 912 aaKnown RBP16.11■□□□□ 0.17
CIRBP-228ENST00000590347 TAOK3Q9H2K8 898 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 CHST7Q9NS84 486 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 STX18Q9P2W9 335 aaKnown RBP16.11■□□□□ 0.17
CIRBP-228ENST00000590347 MINPP1Q9UNW1 487 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 HEY1Q9Y5J3 304 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 ATRNO75882 1429 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 EDF1O60869 148 aaKnown RBP16.11■□□□□ 0.17
CIRBP-228ENST00000590347 TTC4O95801 387 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 TTLL1O95922 423 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 EEF2P13639 858 aaKnown RBP16.11■□□□□ 0.17
CIRBP-228ENST00000590347 ANPEPP15144 967 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 COMTP21964 271 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 NCOA4Q13772 614 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 SCFD1Q8WVM8 642 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 RFFLQ8WZ73 363 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 THTPAQ9BU02 230 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 HEMGNQ9BXL5 484 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 TUBGCP4Q9UGJ1 667 aa16.11■□□□□ 0.17
CIRBP-228ENST00000590347 PAIP2BQ9ULR5 123 aaKnown RBP16.11■□□□□ 0.17
CIRBP-228ENST00000590347 SMCO2A6NFE2 343 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 FOXD2O60548 495 aaPredicted RBP16.1■□□□□ 0.17
CIRBP-228ENST00000590347 ADRA1DP25100 572 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 ADCY8P40145 1251 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 CTC1Q2NKJ3 1217 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 SLC44A4Q53GD3 710 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 LVRNQ6Q4G3 990 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 ZBTB46Q86UZ6 589 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 PNMA1Q8ND90 353 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 CCDC124Q96CT7 223 aaKnown RBP16.1■□□□□ 0.17
CIRBP-228ENST00000590347 GRIP2Q9C0E4 1043 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 SMYD3Q9H7B4 428 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 NUP98P52948 1817 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 CCDC22O60826 627 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 BANF1O75531 89 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 ASMTLO95671 621 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 CHRNA3P32297 505 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 CALCRLQ16602 461 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 SFT2D3Q587I9 215 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 RAD54LQ92698 747 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 RUNDC3BQ96NL0 473 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 SHCBP1LQ9BZQ2 653 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 TRABDQ9H4I3 376 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 STARD13Q9Y3M8 1113 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 MROH7Q68CQ1 1323 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 B2RBV5 119 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 CALM1P0DP23 149 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 CALM2P0DP24 149 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 CALM3P0DP25 149 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 GJC1P36383 396 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 OLFML1Q6UWY5 402 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 FAM196AQ6ZSG2 479 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 RDH13Q8NBN7 331 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 SLC44A5Q8NCS7 719 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 EMILIN3Q9NT22 766 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 NDE1Q9NXR1 346 aa16.1■□□□□ 0.17
CIRBP-228ENST00000590347 TTC7AQ9ULT0 858 aaPredicted RBP16.1■□□□□ 0.17
CIRBP-228ENST00000590347 SFI1A8K8P3 1242 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 MEIS1O00470 390 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 SPOPO43791 374 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 DDAH1O94760 285 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 MKRN3Q13064 507 aaKnown RBP16.09■□□□□ 0.17
CIRBP-228ENST00000590347 NONOQ15233 471 aaKnown RBP eCLIP16.09■□□□□ 0.17
CIRBP-228ENST00000590347 RNF207Q6ZRF8 634 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 RIPOR1Q6ZS17 1223 aa16.09■□□□□ 0.17
CIRBP-228ENST00000590347 ALYREFQ86V81 257 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms